Difference between revisions of "RXN-2762"
Jump to navigation
Jump to search
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-4106 PWY3O-4106] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 t...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINLYA-RXN ARGSUCCINLYA-RXN] == * direction: ** reversible * common-name: ** argininosuccinat...") |
||
Line 1: | Line 1: | ||
− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINLYA-RXN ARGSUCCINLYA-RXN] == |
− | * | + | * direction: |
− | ** | + | ** reversible |
− | |||
− | |||
* common-name: | * common-name: | ||
− | ** | + | ** argininosuccinate lyase |
− | == Reaction(s) | + | * ec-number: |
− | * [[ | + | ** [http://enzyme.expasy.org/EC/4.3.2.1 ec-4.3.2.1] |
− | == | + | == Reaction formula == |
− | * [http://metacyc.org/META/NEW-IMAGE?object= | + | * 1 [[L-ARGININO-SUCCINATE]][c] '''<=>''' 1 [[ARG]][c] '''+''' 1 [[FUM]][c] |
− | {{#set: | + | == Gene(s) associated with this reaction == |
− | {{#set: | + | * Gene: [[SJ20639]] |
− | {{#set: | + | ** Category: [[annotation]] |
− | {{#set: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | {{#set: | + | ** Category: [[orthology]] |
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | == Pathway(s) == | ||
+ | * [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY] | ||
+ | ** '''5''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-4983]], nitric oxide biosynthesis II (mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4983 PWY-4983] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY] | ||
+ | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154] | ||
+ | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24023 24023] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01086 R01086] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P50987 P50987] | ||
+ | ** [http://www.uniprot.org/uniprot/Q46104 Q46104] | ||
+ | ** [http://www.uniprot.org/uniprot/P11447 P11447] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JVG7 Q9JVG7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CJ76 Q9CJ76] | ||
+ | ** [http://www.uniprot.org/uniprot/P44314 P44314] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58201 Q58201] | ||
+ | ** [http://www.uniprot.org/uniprot/P33110 P33110] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01592 Q01592] | ||
+ | ** [http://www.uniprot.org/uniprot/P40369 P40369] | ||
+ | ** [http://www.uniprot.org/uniprot/P50988 P50988] | ||
+ | ** [http://www.uniprot.org/uniprot/P73257 P73257] | ||
+ | ** [http://www.uniprot.org/uniprot/P50514 P50514] | ||
+ | ** [http://www.uniprot.org/uniprot/P04076 P04076] | ||
+ | ** [http://www.uniprot.org/uniprot/P04424 P04424] | ||
+ | ** [http://www.uniprot.org/uniprot/P20673 P20673] | ||
+ | </div> | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=argininosuccinate lyase}} | ||
+ | {{#set: ec-number=ec-4.3.2.1}} | ||
+ | {{#set: nb gene associated=1}} | ||
+ | {{#set: nb pathway associated=6}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}} |
Revision as of 09:33, 27 August 2019
Contents
Reaction ARGSUCCINLYA-RXN
- direction:
- reversible
- common-name:
- argininosuccinate lyase
- ec-number:
Reaction formula
- 1 L-ARGININO-SUCCINATE[c] <=> 1 ARG[c] + 1 FUM[c]
Gene(s) associated with this reaction
- Gene: SJ20639
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- ARGSYN-PWY, L-arginine biosynthesis I (via L-ornithine): ARGSYN-PWY
- 5 reactions found over 4 reactions in the full pathway
- PWY-4983, nitric oxide biosynthesis II (mammals): PWY-4983
- 3 reactions found over 3 reactions in the full pathway
- PWY-7400, L-arginine biosynthesis IV (archaebacteria): PWY-7400
- 7 reactions found over 9 reactions in the full pathway
- PWY-4984, urea cycle: PWY-4984
- 5 reactions found over 5 reactions in the full pathway
- ARGSYNBSUB-PWY, L-arginine biosynthesis II (acetyl cycle): ARGSYNBSUB-PWY
- 9 reactions found over 9 reactions in the full pathway
- PWY-5154, L-arginine biosynthesis III (via N-acetyl-L-citrulline): PWY-5154
- 8 reactions found over 9 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links