Difference between revisions of "RXN-2901"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLEOYL-RXN LINOLEOYL-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=D-PPENTOMUT-RXN D-PPENTOMUT-RXN] == * direction: ** reversible * common-name: ** d-deoxyribose 1,5-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLEOYL-RXN LINOLEOYL-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=D-PPENTOMUT-RXN D-PPENTOMUT-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** d-deoxyribose 1,5-phosphomutase
 +
** deoxyribose 1,5-phosphomutase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.2 ec-3.1.2]
+
** [http://enzyme.expasy.org/EC/5.4.2.7 ec-5.4.2.7]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-18]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[LINOLEIC_ACID]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[DEOXY-D-RIBOSE-1-PHOSPHATE]][c] '''<=>''' 1 [[DEOXY-RIBOSE-5P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ05004]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6917]], vernolate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6917 PWY-6917]
+
* [[PWY-7180]], 2'-deoxy-&alpha;-D-ribose 1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7180 PWY-7180]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27661 27661]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08177 R08177]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02749 R02749]
−
{{#set: direction=left-to-right}}
+
* UNIPROT:
−
{{#set: ec-number=ec-3.1.2}}
+
** [http://www.uniprot.org/uniprot/Q9CH12 Q9CH12]
−
{{#set: nb gene associated=0}}
+
** [http://www.uniprot.org/uniprot/O24821 O24821]
 +
** [http://www.uniprot.org/uniprot/P0A6K6 P0A6K6]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=d-deoxyribose 1,5-phosphomutase|deoxyribose 1,5-phosphomutase}}
 +
{{#set: ec-number=ec-5.4.2.7}}
 +
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:30, 27 August 2019

Reaction D-PPENTOMUT-RXN

  • direction:
    • reversible
  • common-name:
    • d-deoxyribose 1,5-phosphomutase
    • deoxyribose 1,5-phosphomutase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7180, 2'-deoxy-α-D-ribose 1-phosphate degradation: PWY-7180
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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