Difference between revisions of "RXN-2901"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=D-PPENTOMUT-RXN D-PPENTOMUT-RXN] == * direction: ** reversible * common-name: ** d-deoxyribose 1,5-...")
(Created page with "Category:reaction == Reaction HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** s-adenosyl-l-methionine:l-homocysteine s-methyltransf...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=D-PPENTOMUT-RXN D-PPENTOMUT-RXN] ==
+
== Reaction HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** d-deoxyribose 1,5-phosphomutase
+
** s-adenosyl-l-methionine:l-homocysteine s-methyltransferase
−
** deoxyribose 1,5-phosphomutase
+
** s-adenosylmethionine-homocysteine s-methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.4.2.7 ec-5.4.2.7]
+
** [http://enzyme.expasy.org/EC/2.1.1 ec-2.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DEOXY-D-RIBOSE-1-PHOSPHATE]][c] '''<=>''' 1 [[DEOXY-RIBOSE-5P]][c]
+
* 1 [[HOMO-CYS]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05004]]
+
* Gene: [[SJ03226]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ07112]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7180]], 2'-deoxy-&alpha;-D-ribose 1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7180 PWY-7180]
+
* [[PWY-702]], L-methionine biosynthesis II (plants):
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27661 27661]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21821 21821]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02749 R02749]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00650 R00650]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9CH12 Q9CH12]
+
** [http://www.uniprot.org/uniprot/Q9M1W4 Q9M1W4]
−
** [http://www.uniprot.org/uniprot/O24821 O24821]
+
** [http://www.uniprot.org/uniprot/Q9SDL7 Q9SDL7]
−
** [http://www.uniprot.org/uniprot/P0A6K6 P0A6K6]
+
{{#set: direction=left-to-right}}
−
{{#set: direction=reversible}}
+
{{#set: common-name=s-adenosylmethionine-homocysteine s-methyltransferase|s-adenosyl-l-methionine:l-homocysteine s-methyltransferase}}
−
{{#set: common-name=d-deoxyribose 1,5-phosphomutase|deoxyribose 1,5-phosphomutase}}
+
{{#set: ec-number=ec-2.1.1}}
−
{{#set: ec-number=ec-5.4.2.7}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:38, 18 December 2020

Reaction HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • s-adenosyl-l-methionine:l-homocysteine s-methyltransferase
    • s-adenosylmethionine-homocysteine s-methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-702, L-methionine biosynthesis II (plants):
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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