Difference between revisions of "RXN-2962"

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(Created page with "Category:reaction == Reaction UTPHEXPURIDYLYLTRANS-RXN == * direction: ** reversible * common-name: ** udp-galactose pyrophosphorylase ** utp-monosaccharide-1-phosphate ur...")
(Created page with "Category:reaction == Reaction RXN-2962 == * direction: ** left-to-right * common-name: ** formaldehyde dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.284...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction UTPHEXPURIDYLYLTRANS-RXN ==
+
== Reaction RXN-2962 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** udp-galactose pyrophosphorylase
+
** formaldehyde dehydrogenase
−
** utp-monosaccharide-1-phosphate uridylyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.64 ec-2.7.7.64]
+
** [http://enzyme.expasy.org/EC/1.1.1.284 ec-1.1.1.284]
−
** [http://enzyme.expasy.org/EC/2.7.7.10 ec-2.7.7.10]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GALACTOSE-1P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UTP]][c] '''<=>''' 1 [[CPD-14553]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[S-HYDROXYMETHYLGLUTATHIONE]][c] '''=>''' 1 [[CPD-548]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08662]]
+
* Gene: [[SJ21601]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ10502]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ06954]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ05850]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-3821]], D-galactose detoxification:
+
* [[PWY-1801]], formaldehyde oxidation II (glutathione-dependent):
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6527]], stachyose degradation:
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR121649
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14212 14212]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00502 R00502]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07140 R07140]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P22714 P22714]
+
{{#set: common-name=formaldehyde dehydrogenase}}
−
** [http://www.uniprot.org/uniprot/P96994 P96994]
+
{{#set: ec-number=ec-1.1.1.284}}
−
** [http://www.uniprot.org/uniprot/P39575 P39575]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P40908 P40908]
+
{{#set: nb pathway associated=1}}
−
{{#set: direction=reversible}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: common-name=udp-galactose pyrophosphorylase|utp-monosaccharide-1-phosphate uridylyltransferase}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: ec-number=ec-2.7.7.64|ec-2.7.7.10}}
 
−
{{#set: nb gene associated=4}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-2962

  • direction:
    • left-to-right
  • common-name:
    • formaldehyde dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-1801, formaldehyde oxidation II (glutathione-dependent):
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR121649
  • LIGAND-RXN:





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