Difference between revisions of "RXN-3521"

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(Created page with "Category:reaction == Reaction RXN-15122 == * direction: ** reversible * common-name: ** threonine deaminase == Reaction formula == * 1 THR[c] '''<=>''' 1 CPD-15056...")
(Created page with "Category:reaction == Reaction RXN-3521 == * direction: ** left-to-right * common-name: ** l-ascorbate peroxidase * synonymous: ** l-ascorbic acid peroxidase ** ascorbic ac...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-15122 ==
+
== Reaction RXN-3521 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** threonine deaminase
+
** l-ascorbate peroxidase
 +
* synonymous:
 +
** l-ascorbic acid peroxidase
 +
** ascorbic acid peroxidase
 +
** l-ascorbic acid-specific peroxidase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[THR]][c] '''<=>''' 1 [[CPD-15056]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c]
+
* 2 [[ASCORBATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[CPD-318]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08066]]
+
* Gene: [[SJ04585]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ14435]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ10955]]
+
* Gene: [[SJ17253]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16420]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 19: Line 29:
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5437]], L-threonine degradation I:
+
* [[PWY-2261]], ascorbate glutathione cycle:
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5826]], hypoglycin biosynthesis:
 
−
** '''2''' reactions found over '''14''' reactions in the full pathway
 
−
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine):
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR119155
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: direction=reversible}}
+
* METANETX-RXN : MNXR139712
−
{{#set: common-name=threonine deaminase}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R09540 R09540]
−
{{#set: nb pathway associated=3}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30266 30266]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P48534 P48534]
 +
** [http://www.uniprot.org/uniprot/Q7M287 Q7M287]
 +
** [http://www.uniprot.org/uniprot/O49159 O49159]
 +
** [http://www.uniprot.org/uniprot/Q7M3G0 Q7M3G0]
 +
** [http://www.uniprot.org/uniprot/Q05431 Q05431]
 +
** [http://www.uniprot.org/uniprot/Q43824 Q43824]
 +
** [http://www.uniprot.org/uniprot/Q41772 Q41772]
 +
** [http://www.uniprot.org/uniprot/Q41371 Q41371]
 +
** [http://www.uniprot.org/uniprot/Q42661 Q42661]
 +
** [http://www.uniprot.org/uniprot/Q42564 Q42564]
 +
** [http://www.uniprot.org/uniprot/O46921 O46921]
 +
** [http://www.uniprot.org/uniprot/P93404 P93404]
 +
** [http://www.uniprot.org/uniprot/Q9FE01 Q9FE01]
 +
** [http://www.uniprot.org/uniprot/O65634 O65634]
 +
** [http://www.uniprot.org/uniprot/Q39843 Q39843]
 +
** [http://www.uniprot.org/uniprot/O49122 O49122]
 +
** [http://www.uniprot.org/uniprot/O49822 O49822]
 +
** [http://www.uniprot.org/uniprot/Q42459 Q42459]
 +
** [http://www.uniprot.org/uniprot/Q39780 Q39780]
 +
** [http://www.uniprot.org/uniprot/Q96399 Q96399]
 +
** [http://www.uniprot.org/uniprot/O81333 O81333]
 +
** [http://www.uniprot.org/uniprot/O81603 O81603]
 +
** [http://www.uniprot.org/uniprot/O81604 O81604]
 +
** [http://www.uniprot.org/uniprot/Q42909 Q42909]
 +
** [http://www.uniprot.org/uniprot/Q9STM9 Q9STM9]
 +
</div>
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=l-ascorbate peroxidase}}
 +
{{#set: synonymous=l-ascorbic acid peroxidase|l-ascorbic acid-specific peroxidase|ascorbic acid peroxidase}}
 +
{{#set: nb gene associated=4}}
 +
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-3521

  • direction:
    • left-to-right
  • common-name:
    • l-ascorbate peroxidase
  • synonymous:
    • l-ascorbic acid peroxidase
    • ascorbic acid peroxidase
    • l-ascorbic acid-specific peroxidase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2261, ascorbate glutathione cycle:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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