Difference between revisions of "RXN-3701"

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(Created page with "Category:reaction == Reaction GCVP-RXN == * direction: ** reversible * common-name: ** glycine decarboxylase * ec-number: ** [http://enzyme.expasy.org/EC/1.4.4.2 ec-1.4.4....")
(Created page with "Category:reaction == Reaction HOLO-ACP-SYNTH-RXN == * direction: ** left-to-right * common-name: ** holo-[acyl-carrier-protein] synthase * ec-number: ** [http://enzyme.exp...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GCVP-RXN ==
+
== Reaction HOLO-ACP-SYNTH-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** glycine decarboxylase
+
** holo-[acyl-carrier-protein] synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.4.2 ec-1.4.4.2]
+
** [http://enzyme.expasy.org/EC/2.7.8.7 ec-2.7.8.7]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLY]][c] '''+''' 1 [[PROTEIN-LIPOYLLYSINE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[AMINOMETHYLDIHYDROLIPOYL-GCVH]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[CO-A]][c] '''+''' 1 [[apo-ACP]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08557]]
+
* Gene: [[SJ00669]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ06358]]
+
* Gene: [[SJ19702]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLYCLEAV-PWY]], glycine cleavage:
+
* [[PWY-6012]], acyl carrier protein metabolism:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[GLYCINE-SYN2-PWY]], glycine biosynthesis II:
+
* [[PWY-6012-1]], acyl carrier protein activation:
−
** '''2''' reactions found over '''1''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
Line 28: Line 30:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24307 24307]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12069 12069]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03425 R03425]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01625 R01625]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P26969 P26969]
+
** [http://www.uniprot.org/uniprot/Q9PMP8 Q9PMP8]
−
** [http://www.uniprot.org/uniprot/Q9UXT1 Q9UXT1]
+
** [http://www.uniprot.org/uniprot/P24224 P24224]
−
** [http://www.uniprot.org/uniprot/Q9JT86 Q9JT86]
+
** [http://www.uniprot.org/uniprot/O84102 O84102]
−
** [http://www.uniprot.org/uniprot/Q9UXT0 Q9UXT0]
+
** [http://www.uniprot.org/uniprot/Q9RQW2 Q9RQW2]
−
** [http://www.uniprot.org/uniprot/P23378 P23378]
+
** [http://www.uniprot.org/uniprot/O83800 O83800]
−
** [http://www.uniprot.org/uniprot/P33195 P33195]
+
** [http://www.uniprot.org/uniprot/Q9ZCX5 Q9ZCX5]
−
** [http://www.uniprot.org/uniprot/O80988 O80988]
+
** [http://www.uniprot.org/uniprot/Q9ZL36 Q9ZL36]
−
** [http://www.uniprot.org/uniprot/Q94B78 Q94B78]
+
** [http://www.uniprot.org/uniprot/O25488 O25488]
−
** [http://www.uniprot.org/uniprot/O32915 O32915]
+
** [http://www.uniprot.org/uniprot/P96618 P96618]
−
** [http://www.uniprot.org/uniprot/O22575 O22575]
+
** [http://www.uniprot.org/uniprot/O66995 O66995]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/P0A4W8 P0A4W8]
−
{{#set: common-name=glycine decarboxylase}}
+
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.4.4.2}}
+
{{#set: common-name=holo-[acyl-carrier-protein] synthase}}
 +
{{#set: ec-number=ec-2.7.8.7}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}

Revision as of 15:32, 5 January 2021

Reaction HOLO-ACP-SYNTH-RXN

  • direction:
    • left-to-right
  • common-name:
    • holo-[acyl-carrier-protein] synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6012, acyl carrier protein metabolism:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6012-1, acyl carrier protein activation:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "holo-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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