Difference between revisions of "RXN-3741"

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(Created page with "Category:reaction == Reaction SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN == * direction: ** left-to-right * common-name: ** succinate semialdehyde dehydrogenase, nad+-depend...")
(Created page with "Category:reaction == Reaction RXN-3741 == * direction: ** left-to-right * common-name: ** folatepolyglutamate(n) ** folylpolyglutamate γ-glutamyl hydrolase * ec-numb...")
 
(4 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN ==
+
== Reaction RXN-3741 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** succinate semialdehyde dehydrogenase, nad+-dependent
+
** folatepolyglutamate(n)
 +
** folylpolyglutamate γ-glutamyl hydrolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.1.24 ec-1.2.1.24]
+
** [http://enzyme.expasy.org/EC/3.4.19.9 ec-3.4.19.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NAD]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SUC]][c]
+
* 1 [[THF-GLU-N]][c] '''+''' n [[WATER]][c] '''=>''' n [[GLT]][c] '''+''' 1 [[THF]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05897]]
+
* Gene: [[SJ19644]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLUDEG-I-PWY]], GABA shunt:
+
* [[PWY-2161B]], glutamate removal from folates:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-6473]], 4-aminobutanoate degradation IV:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6535]], 4-aminobutanoate degradation I:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-4321]], L-glutamate degradation IV:
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR121683
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13218 13218]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00713 R00713]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P51649 P51649]
 
−
** [http://www.uniprot.org/uniprot/P51650 P51650]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=succinate semialdehyde dehydrogenase, nad+-dependent}}
+
{{#set: common-name=folatepolyglutamate(n)|folylpolyglutamate γ-glutamyl hydrolase}}
−
{{#set: ec-number=ec-1.2.1.24}}
+
{{#set: ec-number=ec-3.4.19.9}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-3741

  • direction:
    • left-to-right
  • common-name:
    • folatepolyglutamate(n)
    • folylpolyglutamate γ-glutamyl hydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2161B, glutamate removal from folates:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR121683





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