Difference between revisions of "RXN-4208-CPD-4124/DIMETHYL-GLYCINE//CPD-4125/BETAINE.44."

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(Created page with "Category:reaction == Reaction R00157 == * direction: ** reversible * common-name: ** uridine triphosphate:amp phosphotransferase == Reaction formula == * 1.0 AMP[c] ''...")
(Created page with "Category:reaction == Reaction RXN3DJ-25 == * direction: ** left-to-right * common-name: ** sphingosine-1-phosphate phosphatase == Reaction formula == * 1 CPD3DJ-11366[...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction R00157 ==
+
== Reaction RXN3DJ-25 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** uridine triphosphate:amp phosphotransferase
+
** sphingosine-1-phosphate phosphatase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[AMP]][c] '''+''' 1.0 [[UTP]][c] '''<=>''' 1.0 [[ADP]][c] '''+''' 1.0 [[UDP]][c]
+
* 1 [[CPD3DJ-11366]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[SPHINGOSINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14895]]
+
* Gene: [[SJ19405]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY3DJ-11470]], sphingosine and sphingosine-1-phosphate metabolism:
 +
** '''3''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* RHEA:
−
{{#set: common-name=uridine triphosphate:amp phosphotransferase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27519 27519]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06521 R06521]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=sphingosine-1-phosphate phosphatase}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:19, 14 January 2021

Reaction RXN3DJ-25

  • direction:
    • left-to-right
  • common-name:
    • sphingosine-1-phosphate phosphatase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY3DJ-11470, sphingosine and sphingosine-1-phosphate metabolism:
    • 3 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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