Difference between revisions of "RXN-4210"

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(Created page with "Category:reaction == Reaction RXN-9634 == * direction: ** left-to-right * common-name: ** 3-hydroxystearoyl-[acyl-carrier protein] dehydratase * ec-number: ** [http://enzy...")
(Created page with "Category:reaction == Reaction URKI-RXN == * direction: ** left-to-right * common-name: ** gtp:uridine 5'-phosphotransferase ** uridine kinase * ec-number: ** [http://enzym...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-9634 ==
+
== Reaction URKI-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-hydroxystearoyl-[acyl-carrier protein] dehydratase
+
** gtp:uridine 5'-phosphotransferase
 +
** uridine kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/2.7.1.48 ec-2.7.1.48]
−
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[R-3-hydroxystearoyl-ACPs]][c] '''=>''' 1 [[Octadec-2-enoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[GTP]][c] '''+''' 1 [[URIDINE]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UMP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10275]]
+
* Gene: [[SJ15690]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06565]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16689]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ02034]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY3O-355]], stearate biosynthesis III (fungi):
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5989]], stearate biosynthesis II (bacteria and plants):
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR105163
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27650 27650]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00968 R00968]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P0A8F4 P0A8F4]
 +
** [http://www.uniprot.org/uniprot/P47622 P47622]
 +
** [http://www.uniprot.org/uniprot/Q9CF21 Q9CF21]
 +
** [http://www.uniprot.org/uniprot/P44533 P44533]
 +
** [http://www.uniprot.org/uniprot/P27515 P27515]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-hydroxystearoyl-[acyl-carrier protein] dehydratase}}
+
{{#set: common-name=uridine kinase|gtp:uridine 5'-phosphotransferase}}
−
{{#set: ec-number=ec-4.2.1.59|ec-2.3.1.86}}
+
{{#set: ec-number=ec-2.7.1.48}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:34, 15 March 2021

Reaction URKI-RXN

  • direction:
    • left-to-right
  • common-name:
    • gtp:uridine 5'-phosphotransferase
    • uridine kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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