Difference between revisions of "RXN-4225"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=N-CARBAMOYLPUTRESCINE-AMIDASE-RXN N-CARBAMOYLPUTRESCINE-AMIDASE-RXN] == * direction: ** left-to-rig...")
(Created page with "Category:reaction == Reaction RXN-4225 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.13 ec-1.14.13] == Reaction formula == * 1 CPD-7...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=N-CARBAMOYLPUTRESCINE-AMIDASE-RXN N-CARBAMOYLPUTRESCINE-AMIDASE-RXN] ==
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== Reaction RXN-4225 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
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* common-name:
 
−
** n-carbamoylputrescine amidohydrolase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.1.53 ec-3.5.1.53]
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** [http://enzyme.expasy.org/EC/1.14.13 ec-1.14.13]
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[CPD-597]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PUTRESCINE]][c]
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* 1 [[CPD-707]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-3943]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ06121]]
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* Gene: [[SJ05072]]
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-43]], putrescine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-43 PWY-43]
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* [[PWY-2582]], brassinosteroid biosynthesis II:
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** '''4''' reactions found over '''21''' reactions in the full pathway
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* [[ARGDEG-III-PWY]], L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-III-PWY ARGDEG-III-PWY]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
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* METANETX-RXN : MNXR143609
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22285 22285]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01152 R01152]
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** [http://www.genome.jp/dbget-bin/www_bget?R07445 R07445]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=n-carbamoylputrescine amidohydrolase}}
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{{#set: ec-number=ec-1.14.13}}
−
{{#set: ec-number=ec-3.5.1.53}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=2}}
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{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-4225

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2582, brassinosteroid biosynthesis II:
    • 4 reactions found over 21 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR143609
  • LIGAND-RXN:





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