Difference between revisions of "RXN-4303"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12727 RXN-12727] == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/5.4...")
(Created page with "Category:reaction == Reaction RXN-4303 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.112 ec-2.5.1.112] == Reaction formula == * 1 A...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12727 RXN-12727] ==
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== Reaction RXN-4303 ==
 
* direction:
 
* direction:
** reversible
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** left-to-right
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/5.4.99.45 ec-5.4.99.45]
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** [http://enzyme.expasy.org/EC/2.5.1.112 ec-2.5.1.112]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[tRNA-uridine-38-39]][c] '''<=>''' 1 [[tRNA-pseudouridine-38-39]][c]
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* 1 [[ATP]][c] '''+''' 1 [[CPD-4211]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-4201]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ10070]]
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* Gene: [[SJ15410]]
** Category: [[annotation]]
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** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-2681]], trans-zeatin biosynthesis:
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** '''4''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
{{#set: direction=reversible}}
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* METANETX-RXN : MNXR111632
{{#set: ec-number=ec-5.4.99.45}}
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=36332 36332]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R08051 R08051]
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{{#set: direction=left-to-right}}
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{{#set: ec-number=ec-2.5.1.112}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=0}}
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{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-4303

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2681, trans-zeatin biosynthesis:
    • 4 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR111632
  • RHEA:
  • LIGAND-RXN: