Difference between revisions of "RXN-4311"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7953 RXN-7953] == * direction: ** left-to-right * common-name: ** [dermatan]-n-acetylgalactosam...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-461 RXN1F-461] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7953 RXN-7953] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-461 RXN1F-461] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** [dermatan]-n-acetylgalactosamine 4-sulfate 6-o-sulfotransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.8.2.33 ec-2.8.2.33]
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** [http://enzyme.expasy.org/EC/2.4.1.91 ec-2.4.1.91]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Dermatan-NAcGal-4-sulfates]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Dermatan-NAcGal-46-disulfates]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[CPD-12575]][c] '''+''' 1 [[CPD1F-90]][c] '''=>''' 1 [[CPD1F-453]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ21107]]
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* Gene: [[SJ06217]]
** Category: [[annotation]]
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** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6568]], dermatan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6568 PWY-6568]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a [http://metacyc.org/META/NEW-IMAGE?object=PWY-7168 PWY-7168]
** '''2''' reactions found over '''4''' reactions in the full pathway
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** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7143]], kaempferol gentiobioside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7143 PWY-7143]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5348]], kaempferol triglucoside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5348 PWY-5348]
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** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5320]], kaempferol glycoside biosynthesis (Arabidopsis): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5320 PWY-5320]
 +
** '''1''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R07288 R07288]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=[dermatan]-n-acetylgalactosamine 4-sulfate 6-o-sulfotransferase}}
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{{#set: ec-number=ec-2.4.1.91}}
{{#set: ec-number=ec-2.8.2.33}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=4}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 09:30, 27 August 2019

Reaction RXN1F-461

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links