Difference between revisions of "RXN-5141"

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(Created page with "Category:reaction == Reaction RXN-10039 == * direction: ** left-to-right * common-name: ** selenocysteine synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.9.1.2 ec-...")
(Created page with "Category:reaction == Reaction RXN-5141 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.128 ec-2.1.1.128] == Reaction formula == * 1 R...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-10039 ==
+
== Reaction RXN-5141 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** selenocysteine synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.9.1.2 ec-2.9.1.2]
+
** [http://enzyme.expasy.org/EC/2.1.1.128 ec-2.1.1.128]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[O-phospho-L-seryl-tRNASecs]][c] '''+''' 1 [[SEPO3]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Charged-SEC-tRNAs]][c] '''+''' 2 [[Pi]][c]
+
* 1 [[R-NORCOCLAURINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[R-COCLAURINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07198]]
+
* Gene: [[SJ10724]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes):
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR116284
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* METANETX-RXN : MNXR121785
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* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25042 25042]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R08224 R08224]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=selenocysteine synthase}}
+
{{#set: ec-number=ec-2.1.1.128}}
−
{{#set: ec-number=ec-2.9.1.2}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-5141

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR121785





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