Difference between revisions of "RXN-5285"

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(Created page with "Category:reaction == Reaction 1.1.1.141-RXN == * direction: ** reversible * common-name: ** 15-hydroxyprostaglandin dehydrogenase (nad+) * ec-number: ** [http://enzyme.exp...")
(Created page with "Category:reaction == Reaction RXN-5285 == * direction: ** left-to-right * common-name: ** 3,8-divinyl-protochlorophyllide oxidoreductase * ec-number: ** [http://enzyme.exp...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.1.1.141-RXN ==
+
== Reaction RXN-5285 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 15-hydroxyprostaglandin dehydrogenase (nad+)
+
** 3,8-divinyl-protochlorophyllide oxidoreductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.141 ec-1.1.1.141]
+
** [http://enzyme.expasy.org/EC/1.3.1.33 ec-1.3.1.33]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[5Z13E-15S-1115-DIHYDROXY-9-OXOPROS]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[HYDROXY-915-DIOXOPROSTA-13-ENOATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[DIVINYL-PROTOCHLOROPHYLLIDE-A]][c] '''+''' 1 [[Light]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[DIVINYLCHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22250]]
+
* Gene: [[SJ12355]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ10632]]
+
* Gene: [[SJ09091]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ22253]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ03882]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ01270]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent):
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR121794
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11879 11879]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02580 R02580]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06286 R06286]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P15428 P15428]
+
{{#set: common-name=3,8-divinyl-protochlorophyllide oxidoreductase}}
−
{{#set: direction=reversible}}
+
{{#set: ec-number=ec-1.3.1.33}}
−
{{#set: common-name=15-hydroxyprostaglandin dehydrogenase (nad+)}}
+
{{#set: nb gene associated=2}}
−
{{#set: ec-number=ec-1.1.1.141}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb gene associated=5}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction RXN-5285

  • direction:
    • left-to-right
  • common-name:
    • 3,8-divinyl-protochlorophyllide oxidoreductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent):
    • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR121794
  • LIGAND-RXN:





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