Difference between revisions of "RXN-5286"

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(Created page with "Category:reaction == Reaction GLUTAMATE-SYNTHASE-NADH-RXN == * direction: ** left-to-right * common-name: ** glutamate synthase * ec-number: ** [http://enzyme.expasy.org/E...")
(Created page with "Category:reaction == Reaction RXN-5286 == * direction: ** left-to-right * common-name: ** 3,8-divinyl-chlorophyllide 8-vinyl reductase * ec-number: ** [http://enzyme.expas...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTAMATE-SYNTHASE-NADH-RXN ==
+
== Reaction RXN-5286 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glutamate synthase
+
** 3,8-divinyl-chlorophyllide 8-vinyl reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.1.14 ec-1.4.1.14]
+
** [http://enzyme.expasy.org/EC/1.3.1.75 ec-1.3.1.75]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[GLT]][c] '''+''' 1 [[NAD]][c]
+
* 1 [[DIVINYLCHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10812]]
+
* Gene: [[SJ12431]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10813]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ20190]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ04922]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6963]], ammonia assimilation cycle I:
+
* [[PWY-5086]], chlorophyll a biosynthesis I:
−
** '''4''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[GLUGLNSYN-PWY]], L-glutamate biosynthesis IV:
+
* [[PWY-7760]], bacteriochlorophyll e biosynthesis:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''1''' reactions found over '''30''' reactions in the full pathway
 +
* [[PWY-7758]], bacteriochlorophyll d biosynthesis:
 +
** '''1''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-7759]], bacteriochlorophyll c biosynthesis:
 +
** '''1''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-5064]], chlorophyll a biosynthesis II:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5526]], bacteriochlorophyll a biosynthesis:
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR97824
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13755 13755]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14451 14451]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00093 R00093]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06272 R06272]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9RXX2 Q9RXX2]
 
−
** [http://www.uniprot.org/uniprot/Q03460 Q03460]
 
−
** [http://www.uniprot.org/uniprot/Q22275 Q22275]
 
−
** [http://www.uniprot.org/uniprot/O61143 O61143]
 
−
** [http://www.uniprot.org/uniprot/Q9C102 Q9C102]
 
−
** [http://www.uniprot.org/uniprot/Q9P540 Q9P540]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glutamate synthase}}
+
{{#set: common-name=3,8-divinyl-chlorophyllide 8-vinyl reductase}}
−
{{#set: ec-number=ec-1.4.1.14}}
+
{{#set: ec-number=ec-1.3.1.75}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=6}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-5286

  • direction:
    • left-to-right
  • common-name:
    • 3,8-divinyl-chlorophyllide 8-vinyl reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5086, chlorophyll a biosynthesis I:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7760, bacteriochlorophyll e biosynthesis:
    • 1 reactions found over 30 reactions in the full pathway
  • PWY-7758, bacteriochlorophyll d biosynthesis:
    • 1 reactions found over 14 reactions in the full pathway
  • PWY-7759, bacteriochlorophyll c biosynthesis:
    • 1 reactions found over 18 reactions in the full pathway
  • PWY-5064, chlorophyll a biosynthesis II:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5526, bacteriochlorophyll a biosynthesis:
    • 5 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR97824
  • RHEA:
  • LIGAND-RXN:





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