Difference between revisions of "RXN-5341"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9896 RXN-9896] == * direction: ** left-to-right == Reaction formula == * 1 3-HYDROXY-N6N6N6-T...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9633 RXN-9633] == * direction: ** left-to-right * common-name: ** 3-oxo-stearoyl-[acyl-carrier...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9896 RXN-9896] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9633 RXN-9633] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 3-oxo-stearoyl-[acyl-carrier protein] reductase
 +
** (r)-3-hydroxystearoyl-[acp] reductase
 +
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE]][c] '''=>''' 1 [[4-TRIMETHYLAMMONIOBUTANAL]][c] '''+''' 1 [[GLY]][c]
+
* 1 [[3-oxo-stearoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxystearoyl-ACPs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06446]]
+
* Gene: [[SJ04229]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ17743]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13014]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6100]], L-carnitine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6100 PWY-6100]
+
* [[PWY-5989]], stearate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03284 R03284]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: common-name=3-oxo-stearoyl-[acyl-carrier protein] reductase|(r)-3-hydroxystearoyl-[acp] reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}}
−
{{#set: nb pathway associated=1}}
+
{{#set: ec-number=ec-1.1.1.100|ec-2.3.1.86}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb gene associated=3}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction RXN-9633

  • direction:
    • left-to-right
  • common-name:
    • 3-oxo-stearoyl-[acyl-carrier protein] reductase
    • (r)-3-hydroxystearoyl-[acp] reductase
    • 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5989, stearate biosynthesis II (bacteria and plants): PWY-5989
    • 6 reactions found over 6 reactions in the full pathway
  • PWY3O-355, stearate biosynthesis III (fungi): PWY3O-355
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • Property "Common-name" (as page type) with input value "3-oxo-stearoyl-[acyl-carrier protein] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "(r)-3-hydroxystearoyl-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] reductase (nadph)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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