Difference between revisions of "RXN-5424"

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(Created page with "Category:reaction == Reaction RXN-9624 == * direction: ** left-to-right * common-name: ** palmitoyl-coa hydrolase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.2.2 ec-3...")
(Created page with "Category:reaction == Reaction RXN-5424 == * direction: ** left-to-right * common-name: ** indole-3-glycol dehydrogenase ** alcohol dehydrogenase (nad) * ec-number: ** [htt...")
 
(5 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-9624 ==
+
== Reaction RXN-5424 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** palmitoyl-coa hydrolase
+
** indole-3-glycol dehydrogenase
 +
** alcohol dehydrogenase (nad)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.2.2 ec-3.1.2.2]
+
** [http://enzyme.expasy.org/EC/1.1.1.1 ec-1.1.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[STEAROYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[STEARIC_ACID]][c]
+
* 1 [[3-INDOLYLGLYCOLALDEHYDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[INDOLE-3-GLYCOL]][c] '''+''' 1 [[NAD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09703]]
+
* Gene: [[SJ14768]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ18316]]
+
* Gene: [[SJ07759]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21601]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY3O-355]], stearate biosynthesis III (fungi):
+
* [[PWY-3162]], L-tryptophan degradation V (side chain pathway):
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-5972]], stearate biosynthesis I (animals):
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6733]], sporopollenin precursors biosynthesis:
 
−
** '''8''' reactions found over '''18''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR121802
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30140 30140]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R08174 R08174]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=palmitoyl-coa hydrolase}}
+
{{#set: common-name=alcohol dehydrogenase (nad)|indole-3-glycol dehydrogenase}}
−
{{#set: ec-number=ec-3.1.2.2}}
+
{{#set: ec-number=ec-1.1.1.1}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-5424

  • direction:
    • left-to-right
  • common-name:
    • indole-3-glycol dehydrogenase
    • alcohol dehydrogenase (nad)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3162, L-tryptophan degradation V (side chain pathway):
    • 2 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR121802





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