Difference between revisions of "RXN-5462"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRS-RXN AIRS-RXN] == * direction: ** left-to-right * common-name: ** phosphoribosylformylglycinami...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.96-RXN 3.2.1.96-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.o...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRS-RXN AIRS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.96-RXN 3.2.1.96-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** phosphoribosylformylglycinamide cyclo-ligase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.3.1 ec-6.3.3.1]
+
** [http://enzyme.expasy.org/EC/3.2.1.96 ec-3.2.1.96]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[WATER]][c] '''+''' 1 [[a-glycopeptide-D-mannosyl-Nsup4sup-N-ace]][c] '''=>''' 1 [[CPD-14375]][c] '''+''' 1 [[N-acetyl-D-glucosamine-asparagine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06408]]
+
* Gene: [[SJ12484]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277]
 
−
** '''6''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23033 23033]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04208 R04208]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P07244 P07244]
+
** [http://www.uniprot.org/uniprot/P13670 P13670]
−
** [http://www.uniprot.org/uniprot/P12043 P12043]
+
** [http://www.uniprot.org/uniprot/P49610 P49610]
−
** [http://www.uniprot.org/uniprot/P21872 P21872]
+
** [http://www.uniprot.org/uniprot/Q9CFI4 Q9CFI4]
−
** [http://www.uniprot.org/uniprot/P08178 P08178]
+
** [http://www.uniprot.org/uniprot/Q9R5G5 Q9R5G5]
−
** [http://www.uniprot.org/uniprot/P00967 P00967]
+
** [http://www.uniprot.org/uniprot/P04067 P04067]
−
** [http://www.uniprot.org/uniprot/P16340 P16340]
 
−
** [http://www.uniprot.org/uniprot/P22102 P22102]
 
−
** [http://www.uniprot.org/uniprot/Q57656 Q57656]
 
−
** [http://www.uniprot.org/uniprot/O66968 O66968]
 
−
** [http://www.uniprot.org/uniprot/Q9JUA2 Q9JUA2]
 
−
** [http://www.uniprot.org/uniprot/P43848 P43848]
 
−
** [http://www.uniprot.org/uniprot/Q9PME0 Q9PME0]
 
−
** [http://www.uniprot.org/uniprot/Q64737 Q64737]
 
−
** [http://www.uniprot.org/uniprot/P20772 P20772]
 
−
** [http://www.uniprot.org/uniprot/Q55422 Q55422]
 
−
** [http://www.uniprot.org/uniprot/P52424 P52424]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=phosphoribosylformylglycinamide cyclo-ligase}}
+
{{#set: ec-number=ec-3.2.1.96}}
−
{{#set: ec-number=ec-6.3.3.1}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction 3.2.1.96-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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