Difference between revisions of "RXN-5466"

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(Created page with "Category:reaction == Reaction ASNSYNA-RXN == * direction: ** left-to-right * common-name: ** asparagine synthase (glutamine-hydrolyzing) ** asparagine synthetase * ec-numb...")
(Created page with "Category:reaction == Reaction RXN-12561 == * direction: ** left-to-right * common-name: ** β-ketovaleryl-coa thiolase * ec-number: ** [http://enzyme.expasy.org/EC/2.3...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ASNSYNA-RXN ==
+
== Reaction RXN-12561 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** asparagine synthase (glutamine-hydrolyzing)
+
** β-ketovaleryl-coa thiolase
−
** asparagine synthetase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.1.1 ec-6.3.1.1]
+
** [http://enzyme.expasy.org/EC/2.3.1.9 ec-2.3.1.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[ASN]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CO-A]][c] '''+''' 1 [[CPD-13534]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[PROPIONYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13939]]
+
* Gene: [[SJ09371]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ13639]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ22095]]
+
* Gene: [[SJ14898]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07729]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ASPARAGINESYN-PWY]], L-asparagine biosynthesis II:
+
* [[PWY-7948]], 4-oxopentanoate degradation:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11373 11373]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00483 R00483]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P00963 P00963]
 
−
** [http://www.uniprot.org/uniprot/P08243 P08243]
 
−
** [http://www.uniprot.org/uniprot/P44338 P44338]
 
−
** [http://www.uniprot.org/uniprot/P49088 P49088]
 
−
** [http://www.uniprot.org/uniprot/P54264 P54264]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=asparagine synthetase|asparagine synthase (glutamine-hydrolyzing)}}
+
{{#set: common-name=β-ketovaleryl-coa thiolase}}
−
{{#set: ec-number=ec-6.3.1.1}}
+
{{#set: ec-number=ec-2.3.1.9}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}

Revision as of 15:33, 5 January 2021

Reaction RXN-12561

  • direction:
    • left-to-right
  • common-name:
    • β-ketovaleryl-coa thiolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7948, 4-oxopentanoate degradation:
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-5466&oldid=75808"