Difference between revisions of "RXN-5471"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-467 PWY1F-467] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-3398 tax-...")
(Created page with "Category:reaction == Reaction RXN1F-19 == * direction: ** left-to-right * common-name: ** allene oxide synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.92 ec-4....")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-467 PWY1F-467] ==
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== Reaction RXN1F-19 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3398 tax-3398]
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** left-to-right
 
* common-name:
 
* common-name:
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** phenylpropanoid biosynthesis, initial reactions
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** allene oxide synthase
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== Reaction(s) found ==
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* ec-number:
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* [[TRANS-CINNAMATE-4-MONOOXYGENASE-RXN]]
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** [http://enzyme.expasy.org/EC/4.2.1.92 ec-4.2.1.92]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE-AMMONIA-LYASE-RXN PHENYLALANINE-AMMONIA-LYASE-RXN]
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* 1 [[CPD-725]][c] '''=>''' 1 [[CPD-728]][c] '''+''' 1 [[WATER]][c]
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{{#set: taxonomic-range=tax-3398}}
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== Gene(s) associated with this reaction  ==
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{{#set: common-name=phenylpropanoid biosynthesis, initial reactions}}
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* Gene: [[SJ07592]]
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{{#set: nb reaction found=1}}
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** Category: [[annotation]]
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{{#set: completion rate=0.5}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb total reaction=2}}
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* Gene: [[SJ03285]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ20926]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ05390]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ05110]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ01682]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s) ==
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* [[PWY-735]], jasmonic acid biosynthesis:
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** '''16''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25075 25075]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R07863 R07863]
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{{#set: direction=left-to-right}}
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{{#set: common-name=allene oxide synthase}}
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{{#set: ec-number=ec-4.2.1.92}}
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{{#set: nb gene associated=6}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:47, 18 December 2020

Reaction RXN1F-19

  • direction:
    • left-to-right
  • common-name:
    • allene oxide synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-735, jasmonic acid biosynthesis:
    • 16 reactions found over 19 reactions in the full pathway

Reconstruction information

External links





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