Difference between revisions of "RXN-5482"

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(Created page with "Category:reaction == Reaction RXN0-2142 == * direction: ** left-to-right * common-name: ** 3-oxo-cis-δ5-dodecenoyl-[acp] reductase ** 3-oxoacyl-[acyl-carrier-protein...")
(Created page with "Category:reaction == Reaction RXN-5482 == * direction: ** left-to-right * common-name: ** udp-l-rhamnose synthase == Reaction formula == * 1 CPD-12575[c] '''+''' 1 N...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-2142 ==
+
== Reaction RXN-5482 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 3-oxo-cis-δ5-dodecenoyl-[acp] reductase
+
** udp-l-rhamnose synthase
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[b-Keto-cis-D5-dodecenoyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[b-Hydroxy-cis-D5-dodecenoyl-ACPs]][c]
+
* 1 [[CPD-12575]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[UDP-L-RHAMNOSE]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ13014]]
+
* Gene: [[SJ16241]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ04229]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ17743]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY0-862]], (5Z)-dodecenoate biosynthesis I:
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-7858]], (5Z)-dodecenoate biosynthesis II:
 
** '''4''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR123135
+
* METANETX-RXN : MNXR144033
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=3-oxo-cis-δ5-dodecenoyl-[acp] reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}}
+
{{#set: common-name=udp-l-rhamnose synthase}}
{{#set: ec-number=ec-1.1.1.100}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction RXN-5482

  • direction:
    • left-to-right
  • common-name:
    • udp-l-rhamnose synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR144033