Difference between revisions of "RXN-5647"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROKAEMPFEROL-4-REDUCTASE-RXN DIHYDROKAEMPFEROL-4-REDUCTASE-RXN] == * direction: ** left-to-rig...")
 
(Created page with "Category:reaction == Reaction RXN-5647 == * direction: ** left-to-right * common-name: ** phosphocholine phosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.75...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROKAEMPFEROL-4-REDUCTASE-RXN DIHYDROKAEMPFEROL-4-REDUCTASE-RXN] ==
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== Reaction RXN-5647 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** phosphocholine phosphatase
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/1.1.1.219 ec-1.1.1.219]
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** [http://enzyme.expasy.org/EC/3.1.3.75 ec-3.1.3.75]
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[DIHYDROKAEMPFEROL-CMPD]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[LEUCOPELARGONIDIN-CMPD]][c] '''+''' 1 [[NADP]][c]
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* 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CHOLINE]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ21972]]
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* Gene: [[SJ21090]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ06064]]
 
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** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ12213]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY1F-823]], leucopelargonidin and leucocyanidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-823 PWY1F-823]
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* [[PWY-3385]], choline biosynthesis I:
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** '''3''' reactions found over '''4''' reactions in the full pathway
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** '''2''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* METANETX-RXN : MNXR96685
 
* RHEA:
 
* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23019 23019]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10493 10493]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R03123 R03123]
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** [http://www.genome.jp/dbget-bin/www_bget?R06871 R06871]
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P51102 P51102]
 
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** [http://www.uniprot.org/uniprot/P14720 P14720]
 
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** [http://www.uniprot.org/uniprot/P14721 P14721]
 
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** [http://www.uniprot.org/uniprot/P51106 P51106]
 
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** [http://www.uniprot.org/uniprot/P51105 P51105]
 
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** [http://www.uniprot.org/uniprot/P51107 P51107]
 
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** [http://www.uniprot.org/uniprot/P73212 P73212]
 
−
** [http://www.uniprot.org/uniprot/O82105 O82105]
 
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** [http://www.uniprot.org/uniprot/Q9SAN4 Q9SAN4]
 
−
** [http://www.uniprot.org/uniprot/P93776 P93776]
 
−
** [http://www.uniprot.org/uniprot/P93777 P93777]
 
−
** [http://www.uniprot.org/uniprot/P94105 P94105]
 
−
** [http://www.uniprot.org/uniprot/O22589 O22589]
 
−
** [http://www.uniprot.org/uniprot/O22605 O22605]
 
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** [http://www.uniprot.org/uniprot/P51104 P51104]
 
−
** [http://www.uniprot.org/uniprot/Q9ZNV0 Q9ZNV0]
 
−
** [http://www.uniprot.org/uniprot/Q9SAY2 Q9SAY2]
 
−
** [http://www.uniprot.org/uniprot/P93840 P93840]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.1.1.219}}
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{{#set: common-name=phosphocholine phosphatase}}
−
{{#set: nb gene associated=3}}
+
{{#set: ec-number=ec-3.1.3.75}}
 +
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-5647

  • direction:
    • left-to-right
  • common-name:
    • phosphocholine phosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3385, choline biosynthesis I:
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR96685
  • RHEA:
  • LIGAND-RXN:





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