Difference between revisions of "RXN-5647"

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(Created page with "Category:reaction == Reaction 2.4.1.145-RXN == * direction: ** left-to-right * common-name: ** alpha-1,3-mannosyl-glycoprotein 4-beta-n-acetylglucosaminyltransferase c * e...")
(Created page with "Category:reaction == Reaction RXN-12455 == * direction: ** left-to-right * common-name: ** trna-dihydrouridine17 synthase * ec-number: ** [http://enzyme.expasy.org/EC/1.3....")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 2.4.1.145-RXN ==
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== Reaction RXN-12455 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** alpha-1,3-mannosyl-glycoprotein 4-beta-n-acetylglucosaminyltransferase c
+
** trna-dihydrouridine17 synthase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.4.1.145 ec-2.4.1.145]
+
** [http://enzyme.expasy.org/EC/1.3.1.88 ec-1.3.1.88]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[2-2-N-linked-Glycan]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[24-2-N-linked-Glycan]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Uracil17-in-tRNAs]][c] '''=>''' 1 [[56-Dihydrouracil17-in-tRNAs]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ13702]]
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* Gene: [[SJ02952]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03254]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7426]], complex N-linked glycan biosynthesis (vertebrates):
 
** '''4''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* UNIPROT:
+
* RHEA:
** [http://www.uniprot.org/uniprot/P23336 P23336]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=53370 53370]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=alpha-1,3-mannosyl-glycoprotein 4-beta-n-acetylglucosaminyltransferase c}}
+
{{#set: common-name=trna-dihydrouridine17 synthase}}
{{#set: ec-number=ec-2.4.1.145}}
+
{{#set: ec-number=ec-1.3.1.88}}
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:15, 14 January 2021

Reaction RXN-12455

  • direction:
    • left-to-right
  • common-name:
    • trna-dihydrouridine17 synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links