Difference between revisions of "RXN-5901"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction GLUTAMINE--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** glutamine-trna ligase * ec-number: ** [http://enzyme.expasy.org...")
(Created page with "Category:reaction == Reaction RXN-5901 == * direction: ** left-to-right * common-name: ** acetoacetyl-coa reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.36 e...")
 
(2 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTAMINE--TRNA-LIGASE-RXN ==
+
== Reaction RXN-5901 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glutamine-trna ligase
+
** acetoacetyl-coa reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.1.1.18 ec-6.1.1.18]
+
** [http://enzyme.expasy.org/EC/1.1.1.36 ec-1.1.1.36]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[GLN-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-GLN-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[ACETOACETYL-COA]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-650]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16362]]
+
* Gene: [[SJ01444]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ22527]]
+
* Gene: [[SJ06969]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21190]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging:
+
* [[PWY1-3]], polyhydroxybutanoate biosynthesis:
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7216]], (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered):
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5741]], ethylmalonyl-CoA pathway:
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5676]], acetyl-CoA fermentation to butanoate II:
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR107256
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20122 20122]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=45798 45798]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03652 R03652]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01977 R01977]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/O59314 O59314]
 
−
** [http://www.uniprot.org/uniprot/P43831 P43831]
 
−
** [http://www.uniprot.org/uniprot/P47897 P47897]
 
−
** [http://www.uniprot.org/uniprot/P14325 P14325]
 
−
** [http://www.uniprot.org/uniprot/P95968 P95968]
 
−
** [http://www.uniprot.org/uniprot/P13188 P13188]
 
−
** [http://www.uniprot.org/uniprot/P00962 P00962]
 
−
** [http://www.uniprot.org/uniprot/P52780 P52780]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glutamine-trna ligase}}
+
{{#set: common-name=acetoacetyl-coa reductase}}
−
{{#set: ec-number=ec-6.1.1.18}}
+
{{#set: ec-number=ec-1.1.1.36}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-5901

  • direction:
    • left-to-right
  • common-name:
    • acetoacetyl-coa reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY1-3, polyhydroxybutanoate biosynthesis:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7216, (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered):
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-5741, ethylmalonyl-CoA pathway:
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-5676, acetyl-CoA fermentation to butanoate II:
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR107256
  • RHEA:
  • LIGAND-RXN:





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-5901&oldid=141110"