Difference between revisions of "RXN-5901"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5260 RXN0-5260] == * direction: ** left-to-right * common-name: ** sn-glycerol 3-phosphate:ubi...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14014 RXN-14014] == * direction: ** left-to-right * common-name: ** 4-hydroxy-tetrahydrodipicol...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5260 RXN0-5260] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14014 RXN-14014] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** sn-glycerol 3-phosphate:ubiquinone oxidoreductase
+
** 4-hydroxy-tetrahydrodipicolinate reductase
−
** glycerol-3-phosphate dehydrogenase, aerobic
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.5.3 ec-1.1.5.3]
+
** [http://enzyme.expasy.org/EC/1.17.1.8 ec-1.17.1.8]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLYCEROL-3P]][c] '''+''' 1 [[Ubiquinones]][c] '''=>''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[Ubiquinols]][c]
+
* 1 [[CPD-14443]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18572]]
+
* Gene: [[SJ17695]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1584]], nitrate reduction X (dissimilatory, periplasmic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1584 PWY0-1584]
+
* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY0-1561]], glycerol-3-phosphate to cytochrome bo oxidase electron transfer: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1561 PWY0-1561]
+
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28756 28756]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=35333 35333]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00849 R00849]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04199 R04199]
−
** [http://www.genome.jp/dbget-bin/www_bget?R08657 R08657]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04198 R04198]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glycerol-3-phosphate dehydrogenase, aerobic|sn-glycerol 3-phosphate:ubiquinone oxidoreductase}}
+
{{#set: common-name=4-hydroxy-tetrahydrodipicolinate reductase}}
−
{{#set: ec-number=ec-1.1.5.3}}
+
{{#set: ec-number=ec-1.17.1.8}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:28, 26 August 2019

Reaction RXN-14014

  • direction:
    • left-to-right
  • common-name:
    • 4-hydroxy-tetrahydrodipicolinate reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2941, L-lysine biosynthesis II: PWY-2941
    • 6 reactions found over 9 reactions in the full pathway
  • DAPLYSINESYN-PWY, L-lysine biosynthesis I: DAPLYSINESYN-PWY
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-5097, L-lysine biosynthesis VI: PWY-5097
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-2942, L-lysine biosynthesis III: PWY-2942
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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