Difference between revisions of "RXN-600"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-...") |
(Created page with "Category:reaction == Reaction SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN == * direction: ** left-to-right * common-name: ** succinate semialdehyde dehydrogenase, nad+-depend...") |
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| − | [[Category: | + | [[Category:reaction]] |
| − | == | + | == Reaction SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN == |
| − | * | + | * direction: |
| − | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
| − | ** | + | ** succinate semialdehyde dehydrogenase, nad+-dependent |
| − | == | + | * ec-number: |
| − | * [[ | + | ** [http://enzyme.expasy.org/EC/1.2.1.24 ec-1.2.1.24] |
| − | * [[ | + | == Reaction formula == |
| − | * [[ | + | * 1 [[NAD]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SUC]][c] |
| − | * [[ | + | == Gene(s) associated with this reaction == |
| − | * [[ | + | * Gene: [[SJ05897]] |
| − | * [[ | + | ** Category: [[annotation]] |
| − | == | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | + | ** Category: [[orthology]] | |
| − | {{#set: | + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | {{#set: common-name= | + | == Pathway(s) == |
| − | {{#set: nb | + | * [[GLUDEG-I-PWY]], GABA shunt: |
| − | {{#set: | + | ** '''4''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: | + | * [[PWY-6473]], 4-aminobutanoate degradation IV: |
| + | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-6535]], 4-aminobutanoate degradation I: | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-4321]], L-glutamate degradation IV: | ||
| + | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13218 13218] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00713 R00713] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P51649 P51649] | ||
| + | ** [http://www.uniprot.org/uniprot/P51650 P51650] | ||
| + | {{#set: direction=left-to-right}} | ||
| + | {{#set: common-name=succinate semialdehyde dehydrogenase, nad+-dependent}} | ||
| + | {{#set: ec-number=ec-1.2.1.24}} | ||
| + | {{#set: nb gene associated=1}} | ||
| + | {{#set: nb pathway associated=4}} | ||
| + | {{#set: reconstruction category=annotation|orthology}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
| + | {{#set: reconstruction comment=n.a}} | ||
| + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}} | ||
Revision as of 20:44, 18 December 2020
Contents
Reaction SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN
- direction:
- left-to-right
- common-name:
- succinate semialdehyde dehydrogenase, nad+-dependent
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ05897
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- GLUDEG-I-PWY, GABA shunt:
- 4 reactions found over 4 reactions in the full pathway
- PWY-6473, 4-aminobutanoate degradation IV:
- 1 reactions found over 2 reactions in the full pathway
- PWY-6535, 4-aminobutanoate degradation I:
- 2 reactions found over 2 reactions in the full pathway
- PWY-4321, L-glutamate degradation IV:
- 3 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
External links
