Difference between revisions of "RXN-6002"

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(Created page with "Category:reaction == Reaction PYRROLINECARBDEHYDROG-RXN == * direction: ** left-to-right * common-name: ** 1-pyrroline-5-carboxylate dehydrogenase == Reaction formula == *...")
(Created page with "Category:reaction == Reaction RXN-6002 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.4 ec-1.2.1.4] == Reaction formula == * 1 CPD-1...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PYRROLINECARBDEHYDROG-RXN ==
+
== Reaction RXN-6002 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
+
* ec-number:
−
** 1-pyrroline-5-carboxylate dehydrogenase
+
** [http://enzyme.expasy.org/EC/1.2.1.4 ec-1.2.1.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[NAD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-16618]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MAL]][c] '''+''' 1 [[NADPH]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10107]]
+
* Gene: [[SJ06456]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06470]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-3641]], L-carnitine degradation III:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR102301
+
* METANETX-RXN : MNXR121833
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16418 16418]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00707 R00707]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9ZN12 Q9ZN12]
 
−
** [http://www.uniprot.org/uniprot/Q9PMG0 Q9PMG0]
 
−
** [http://www.uniprot.org/uniprot/P09546 P09546]
 
−
** [http://www.uniprot.org/uniprot/Q9JSY1 Q9JSY1]
 
−
** [http://www.uniprot.org/uniprot/Q9K0Z9 Q9K0Z9]
 
−
** [http://www.uniprot.org/uniprot/O24897 O24897]
 
−
** [http://www.uniprot.org/uniprot/Q59426 Q59426]
 
−
** [http://www.uniprot.org/uniprot/P07275 P07275]
 
−
** [http://www.uniprot.org/uniprot/P10503 P10503]
 
−
** [http://www.uniprot.org/uniprot/P74275 P74275]
 
−
** [http://www.uniprot.org/uniprot/O74766 O74766]
 
−
** [http://www.uniprot.org/uniprot/P95629 P95629]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=1-pyrroline-5-carboxylate dehydrogenase}}
+
{{#set: ec-number=ec-1.2.1.4}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-6002

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3641, L-carnitine degradation III:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR121833





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