Difference between revisions of "RXN-602"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HACD5m HACD5m] == * direction: ** reversible * common-name: ** 3-hydroxyacyl-coa dehydrogenase (c12...")
(Created page with "Category:reaction == Reaction RXN-7699 == * direction: ** reversible * common-name: ** d-specific enoyl-coa hydratase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.11...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HACD5m HACD5m] ==
+
== Reaction RXN-7699 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** 3-hydroxyacyl-coa dehydrogenase (c12:0)
+
** d-specific enoyl-coa hydratase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/4.2.1.119 ec-4.2.1.119]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[CPD0-2105]][m] '''+''' 1.0 [[NADH]][m] '''+''' 1.0 [[PROTON]][m] '''<=>''' 1.0 [[CPD0-2107]][m] '''+''' 1.0 [[NAD]][m]
+
* 1 [[D-3-HYDROXYACYL-COA]][c] '''<=>''' 1 [[TRANS-D2-ENOYL-COA]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
* Gene: [[SJ03584]]
 
* Gene: [[SJ03584]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ21390]]
+
* Gene: [[SJ04769]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6657]], polyhydroxydecanoate biosynthesis:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7288]], fatty acid &beta;-oxidation VII (yeast peroxisome):
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5138]], fatty acid &beta;-oxidation IV (unsaturated, even number):
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY66-391]], fatty acid &beta;-oxidation VI (mammalian peroxisome):
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26529 26529]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R09698 R09698]
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=3-hydroxyacyl-coa dehydrogenase (c12:0)}}
+
{{#set: common-name=d-specific enoyl-coa hydratase}}
 +
{{#set: ec-number=ec-4.2.1.119}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:41, 18 December 2020

Reaction RXN-7699

  • direction:
    • reversible
  • common-name:
    • d-specific enoyl-coa hydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6657, polyhydroxydecanoate biosynthesis:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7288, fatty acid β-oxidation VII (yeast peroxisome):
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5138, fatty acid β-oxidation IV (unsaturated, even number):
    • 4 reactions found over 5 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (mammalian peroxisome):
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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