Difference between revisions of "RXN-6341"

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(Created page with "Category:reaction == Reaction RXN-13279-CPD-14916/NADP//CPD0-2106/NADPH/PROTON.39. == * direction: ** reversible == Reaction formula == * 1.0 CPD-14916[c] '''+''' 1.0...")
(Created page with "Category:reaction == Reaction RXN-17252 == * direction: ** left-to-right * common-name: ** pheophorbide a oxygenase == Reaction formula == * 1 CPD-7061[c] '''+''' 1 ...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-13279-CPD-14916/NADP//CPD0-2106/NADPH/PROTON.39. ==
+
== Reaction RXN-17252 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** pheophorbide a oxygenase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[CPD-14916]][c] '''+''' 1.0 [[NADP]][c] '''<=>''' 1.0 [[CPD0-2106]][c] '''+''' 1.0 [[NADPH]][c] '''+''' 1.0 [[PROTON]][c]
+
* 1 [[CPD-7061]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD-18666]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ17313]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ22311]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ08869]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07178]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ00278]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ22309]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6927]], chlorophyll a degradation II:
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5098]], chlorophyll a degradation I:
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* RHEA:
−
{{#set: nb gene associated=0}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=48161 48161]
−
{{#set: nb pathway associated=0}}
+
{{#set: direction=left-to-right}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: common-name=pheophorbide a oxygenase}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: nb gene associated=6}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:01, 14 January 2021

Reaction RXN-17252

  • direction:
    • left-to-right
  • common-name:
    • pheophorbide a oxygenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6927, chlorophyll a degradation II:
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5098, chlorophyll a degradation I:
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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