Difference between revisions of "RXN-6382"
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(Created page with "Category:reaction == Reaction RXN-9633 == * direction: ** left-to-right * common-name: ** 3-oxo-stearoyl-[acyl-carrier protein] reductase ** (r)-3-hydroxystearoyl-[acp] re...") |
(Created page with "Category:reaction == Reaction RXN0-1147 == * direction: ** reversible * common-name: ** dihydrolipoyltranssuccinylase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.61...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN0-1147 == |
* direction: | * direction: | ||
| − | ** | + | ** reversible |
* common-name: | * common-name: | ||
| − | ** | + | ** dihydrolipoyltranssuccinylase |
| − | |||
| − | |||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/2.3.1. | + | ** [http://enzyme.expasy.org/EC/2.3.1.61 ec-2.3.1.61] |
| − | |||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[Oxo-glutarate-dehydrogenase-DH-lipoyl]][c] '''+''' 1 [[SUC-COA]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[Oxo-glutarate-dehydro-suc-DH-lipoyl]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ02117]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[SJ19201]] |
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[SJ13629]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ06474]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-5084]], 2-oxoglutarate decarboxylation to succinyl-CoA: |
| − | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | * [[ | + | * [[PWY66-398]], TCA cycle III (animals): |
| − | ** ''' | + | ** '''10''' reactions found over '''10''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| − | {{#set: direction= | + | * LIGAND-RXN: |
| − | {{#set: common-name= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02570 R02570] |
| − | {{#set: ec-number= | + | {{#set: direction=reversible}} |
| − | {{#set: nb gene associated= | + | {{#set: common-name=dihydrolipoyltranssuccinylase}} |
| + | {{#set: ec-number=ec-2.3.1.61}} | ||
| + | {{#set: nb gene associated=4}} | ||
{{#set: nb pathway associated=2}} | {{#set: nb pathway associated=2}} | ||
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
Revision as of 11:25, 15 January 2021
Contents
Reaction RXN0-1147
- direction:
- reversible
- common-name:
- dihydrolipoyltranssuccinylase
- ec-number:
Reaction formula
- 1 Oxo-glutarate-dehydrogenase-DH-lipoyl[c] + 1 SUC-COA[c] <=> 1 CO-A[c] + 1 Oxo-glutarate-dehydro-suc-DH-lipoyl[c]
Gene(s) associated with this reaction
- Gene: SJ02117
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ19201
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ13629
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ06474
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-5084, 2-oxoglutarate decarboxylation to succinyl-CoA:
- 3 reactions found over 3 reactions in the full pathway
- PWY66-398, TCA cycle III (animals):
- 10 reactions found over 10 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- LIGAND-RXN:
