Difference between revisions of "RXN-6550"
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(Created page with "Category:reaction == Reaction RXN-12461 == * direction: ** left-to-right * common-name: ** trna (carboxymethyluridine34-5-o)-methyltransferase * ec-number: ** [http://enzy...") |
(Created page with "Category:reaction == Reaction RXN-6550 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11 ec-1.14.11] == Reaction formula == * 1 2-KET...") |
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| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN- | + | == Reaction RXN-6550 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| − | |||
| − | |||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.14.11 ec-1.14.11] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD1F-137]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-6224]][c] '''+''' 1 [[SUC]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ14675]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** Source: [[ | + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | * Gene: [[ | + | * Gene: [[SJ07557]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** Source: [[ | + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ14670]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ14672]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ08018]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-102]], gibberellin inactivation I (2β-hydroxylation): |
| − | ** ''' | + | ** '''4''' reactions found over '''11''' reactions in the full pathway |
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[ | + | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| − | * | + | * METANETX-RXN : MNXR110158 |
| − | ** [http://www. | + | * LIGAND-RXN: |
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R06338 R06338] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | + | {{#set: ec-number=ec-1.14.11}} | |
| − | {{#set: ec-number=ec- | + | {{#set: nb gene associated=5}} |
| − | {{#set: nb gene associated= | + | {{#set: nb pathway associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: reconstruction category=orthology}} |
| − | {{#set: reconstruction category= | + | {{#set: reconstruction tool=pantograph}} |
| − | {{#set: reconstruction tool= | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}} |
Latest revision as of 11:21, 18 March 2021
Contents
Reaction RXN-6550
- direction:
- left-to-right
- ec-number:
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 CPD1F-137[c] + 1 OXYGEN-MOLECULE[c] => 1 CARBON-DIOXIDE[c] + 1 CPD-6224[c] + 1 SUC[c]
Gene(s) associated with this reaction
- Gene: SJ14675
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ07557
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ14670
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ14672
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ08018
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-102, gibberellin inactivation I (2β-hydroxylation):
- 4 reactions found over 11 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- METANETX-RXN : MNXR110158
- LIGAND-RXN:
