Difference between revisions of "RXN-6642"

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(Created page with "Category:reaction == Reaction QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.29 ec-2.4.2.29] ==...")
(Created page with "Category:reaction == Reaction RXN-6642 == * direction: ** left-to-right * common-name: ** [cys-gly]-s-conjugate dipeptidase * ec-number: ** [http://enzyme.expasy.org/EC/3....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN ==
+
== Reaction RXN-6642 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** [cys-gly]-s-conjugate dipeptidase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.4.2.29 ec-2.4.2.29]
+
** [http://enzyme.expasy.org/EC/3.4.11.2 ec-3.4.11.2]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Guanine34-in-tRNAs]][c] '''+''' 1 [[QUEUINE]][c] '''=>''' 1 [[GUANINE]][c] '''+''' 1 [[tRNAs-with-queuine]][c]
+
* 1 [[CPD-6262]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLY]][c] '''+''' 1 [[S-Substituted-L-Cysteines]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ12245]]
+
* Gene: [[SJ10244]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 14: Line 16:
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6842]], glutathione-mediated detoxification II:
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4061]], glutathione-mediated detoxification I:
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR116176
+
* METANETX-RXN : MNXR121867
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03789 R03789]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P44594 P44594]
 
** [http://www.uniprot.org/uniprot/Q9JVA4 Q9JVA4]
 
** [http://www.uniprot.org/uniprot/O32053 O32053]
 
** [http://www.uniprot.org/uniprot/P0A847 P0A847]
 
** [http://www.uniprot.org/uniprot/Q57878 Q57878]
 
** [http://www.uniprot.org/uniprot/O28787 O28787]
 
** [http://www.uniprot.org/uniprot/P54578 P54578]
 
** [http://www.uniprot.org/uniprot/Q9PNT0 Q9PNT0]
 
** [http://www.uniprot.org/uniprot/O67331 O67331]
 
** [http://www.uniprot.org/uniprot/Q9CJ54 Q9CJ54]
 
** [http://www.uniprot.org/uniprot/P40826 P40826]
 
** [http://www.uniprot.org/uniprot/Q55983 Q55983]
 
** [http://www.uniprot.org/uniprot/Q17361 Q17361]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-2.4.2.29}}
+
{{#set: common-name=[cys-gly]-s-conjugate dipeptidase}}
 +
{{#set: ec-number=ec-3.4.11.2}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction RXN-6642

  • direction:
    • left-to-right
  • common-name:
    • [cys-gly]-s-conjugate dipeptidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6842, glutathione-mediated detoxification II:
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061, glutathione-mediated detoxification I:
    • 4 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR121867

Property "Common-name" (as page type) with input value "cys-gly]-s-conjugate dipeptidase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.