Difference between revisions of "RXN-7163"

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(Created page with "Category:reaction == Reaction PRPPSYN-RXN == * direction: ** reversible * common-name: ** ribose phosphate diphosphokinase ** ribose-phosphate diphosphokinase * ec-number:...")
(Created page with "Category:reaction == Reaction RXN-7163 == * direction: ** left-to-right * common-name: ** inositol-1,3,4,5,6-pentakisphosphate 2-kinase * ec-number: ** [http://enzyme.expa...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PRPPSYN-RXN ==
+
== Reaction RXN-7163 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** ribose phosphate diphosphokinase
+
** inositol-1,3,4,5,6-pentakisphosphate 2-kinase
−
** ribose-phosphate diphosphokinase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.6.1 ec-2.7.6.1]
+
** [http://enzyme.expasy.org/EC/2.7.1.158 ec-2.7.1.158]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[RIBOSE-5P]][c] '''<=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PRPP]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CPD-1107]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[MI-HEXAKISPHOSPHATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ21412]]
−
* Gene: [[SJ07300]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ08336]]
+
* Gene: [[SJ22245]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ17219]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ11019]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-662]], PRPP biosynthesis:
+
* [[PWY-6554]], 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3):
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-4661]], 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza):
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6372]], 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium):
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6361]], 1D-myo-inositol hexakisphosphate biosynthesis I (from Ins(1,4,5)P3):
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6362]], 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian):
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6369]], inositol diphosphates biosynthesis:
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR109392
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15612 15612]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20314 20314]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01049 R01049]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05202 R05202]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q63468 Q63468]
+
{{#set: common-name=inositol-1,3,4,5,6-pentakisphosphate 2-kinase}}
−
** [http://www.uniprot.org/uniprot/Q9CEI4 Q9CEI4]
+
{{#set: ec-number=ec-2.7.1.158}}
−
** [http://www.uniprot.org/uniprot/O67556 O67556]
+
{{#set: nb gene associated=2}}
−
** [http://www.uniprot.org/uniprot/P44328 P44328]
+
{{#set: nb pathway associated=6}}
−
** [http://www.uniprot.org/uniprot/Q9PP15 Q9PP15]
+
{{#set: reconstruction category=orthology|annotation}}
−
** [http://www.uniprot.org/uniprot/P56184 P56184]
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P65235 P65235]
 
−
** [http://www.uniprot.org/uniprot/Q9CHB8 Q9CHB8]
 
−
** [http://www.uniprot.org/uniprot/P42816 P42816]
 
−
** [http://www.uniprot.org/uniprot/Q59988 Q59988]
 
−
** [http://www.uniprot.org/uniprot/P14193 P14193]
 
−
** [http://www.uniprot.org/uniprot/P0A1V6 P0A1V6]
 
−
** [http://www.uniprot.org/uniprot/P0A717 P0A717]
 
−
** [http://www.uniprot.org/uniprot/P60891 P60891]
 
−
** [http://www.uniprot.org/uniprot/P11908 P11908]
 
−
** [http://www.uniprot.org/uniprot/P21108 P21108]
 
−
** [http://www.uniprot.org/uniprot/P60892 P60892]
 
−
** [http://www.uniprot.org/uniprot/P09330 P09330]
 
−
** [http://www.uniprot.org/uniprot/P32895 P32895]
 
−
** [http://www.uniprot.org/uniprot/Q59489 Q59489]
 
−
** [http://www.uniprot.org/uniprot/P38620 P38620]
 
−
** [http://www.uniprot.org/uniprot/P38063 P38063]
 
−
** [http://www.uniprot.org/uniprot/P38689 P38689]
 
−
** [http://www.uniprot.org/uniprot/Q42581 Q42581]
 
−
** [http://www.uniprot.org/uniprot/P41831 P41831]
 
−
** [http://www.uniprot.org/uniprot/P46585 P46585]
 
−
** [http://www.uniprot.org/uniprot/Q42583 Q42583]
 
−
** [http://www.uniprot.org/uniprot/Q14558 Q14558]
 
−
** [http://www.uniprot.org/uniprot/Q55848 Q55848]
 
−
** [http://www.uniprot.org/uniprot/Q49042 Q49042]
 
−
** [http://www.uniprot.org/uniprot/O64888 O64888]
 
−
** [http://www.uniprot.org/uniprot/Q680A5 Q680A5]
 
−
** [http://www.uniprot.org/uniprot/Q93Z66 Q93Z66]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=ribose-phosphate diphosphokinase|ribose phosphate diphosphokinase}}
 
−
{{#set: ec-number=ec-2.7.6.1}}
 
−
{{#set: nb gene associated=4}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-7163

  • direction:
    • left-to-right
  • common-name:
    • inositol-1,3,4,5,6-pentakisphosphate 2-kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6554, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3):
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-4661, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza):
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6372, 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium):
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6361, 1D-myo-inositol hexakisphosphate biosynthesis I (from Ins(1,4,5)P3):
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6362, 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian):
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6369, inositol diphosphates biosynthesis:
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR109392
  • RHEA:
  • LIGAND-RXN:





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