Difference between revisions of "RXN-7609"

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(Created page with "Category:reaction == Reaction RXN-9 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.3 ec-2.1.3] == Reaction formula == * 1 [[CARBAMOYL-P]...")
(Created page with "Category:reaction == Reaction RXN-7609 == * direction: ** left-to-right * common-name: ** 5'-nucleotidase ** guanosine-5'-phosphate phosphohydrolase * ec-number: ** [http:...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-9 ==
+
== Reaction RXN-7609 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 5'-nucleotidase
 +
** guanosine-5'-phosphate phosphohydrolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.3 ec-2.1.3]
+
** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CARBAMOYL-P]][c] '''+''' 1 [[L-CANALINE]][c] '''=>''' 1 [[O-UREIDOHOMOSERINE]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[GMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GUANOSINE]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18541]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ04587]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18402]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18895]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ15366]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16098]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ09030]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5]], canavanine biosynthesis:
+
* [[PWY-6606]], guanosine nucleotides degradation II:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6607]], guanosine nucleotides degradation I:
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6608]], guanosine nucleotides degradation III:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR100381
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27715 27715]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01227 R01227]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.1.3}}
+
{{#set: common-name=5'-nucleotidase|guanosine-5'-phosphate phosphohydrolase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-3.1.3.5}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=6}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN-7609

  • direction:
    • left-to-right
  • common-name:
    • 5'-nucleotidase
    • guanosine-5'-phosphate phosphohydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6606, guanosine nucleotides degradation II:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6607, guanosine nucleotides degradation I:
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6608, guanosine nucleotides degradation III:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR100381
  • RHEA:
  • LIGAND-RXN:





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