Difference between revisions of "RXN-7659"

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(Created page with "Category:reaction == Reaction 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN == * direction: ** left-to-right * common-name: ** acyl-[acp]:1-acyl-sn-glycerol-3-phosphate 2-o-acyltran...")
(Created page with "Category:reaction == Reaction RXN-7659 == * direction: ** reversible * common-name: ** dihydrogeranylgeranyl diphosphate reductase == Reaction formula == * 1 CPD-7003[...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN ==
+
== Reaction RXN-7659 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** acyl-[acp]:1-acyl-sn-glycerol-3-phosphate 2-o-acyltransferase
+
** dihydrogeranylgeranyl diphosphate reductase
−
** 1-acylglycerol-3-phosphate o-acyltransferase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.3.1.51 ec-2.3.1.51]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACYL-ACP]][c] '''+''' 1 [[ACYL-SN-GLYCEROL-3P]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c]
+
* 1 [[CPD-7003]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[CPD-7002]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ15264]]
−
* Gene: [[SJ20565]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13801]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ10647]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ01857]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13643]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ15136]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ09888]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ18009]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ13501]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ08831]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5981]], CDP-diacylglycerol biosynthesis III:
+
* [[PWY-5063]], phytyl diphosphate biosynthesis:
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY0-1319]], CDP-diacylglycerol biosynthesis II:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR112254
−
* METANETX-RXN : MNXR114877
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42297 42297]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R09381 R09381]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08755 R08755]
−
* UNIPROT:
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/Q9JU41 Q9JU41]
+
{{#set: common-name=dihydrogeranylgeranyl diphosphate reductase}}
−
** [http://www.uniprot.org/uniprot/Q9XDL6 Q9XDL6]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P0A257 P0A257]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/O07809 O07809]
 
−
** [http://www.uniprot.org/uniprot/Q9ZD75 Q9ZD75]
 
−
** [http://www.uniprot.org/uniprot/Q9ZJN8 Q9ZJN8]
 
−
** [http://www.uniprot.org/uniprot/Q9Z7Y4 Q9Z7Y4]
 
−
** [http://www.uniprot.org/uniprot/O07808 O07808]
 
−
** [http://www.uniprot.org/uniprot/Q9KP63 Q9KP63]
 
−
** [http://www.uniprot.org/uniprot/P44848 P44848]
 
−
** [http://www.uniprot.org/uniprot/Q49402 Q49402]
 
−
** [http://www.uniprot.org/uniprot/O25903 O25903]
 
−
** [http://www.uniprot.org/uniprot/O07807 O07807]
 
−
** [http://www.uniprot.org/uniprot/O07584 O07584]
 
−
** [http://www.uniprot.org/uniprot/Q59188 Q59188]
 
−
** [http://www.uniprot.org/uniprot/Q9PHZ5 Q9PHZ5]
 
−
** [http://www.uniprot.org/uniprot/O53516 O53516]
 
−
** [http://www.uniprot.org/uniprot/O84459 O84459]
 
−
** [http://www.uniprot.org/uniprot/Q9RRA7 Q9RRA7]
 
−
** [http://www.uniprot.org/uniprot/O35083 O35083]
 
−
** [http://www.uniprot.org/uniprot/P26647 P26647]
 
−
** [http://www.uniprot.org/uniprot/Q42870 Q42870]
 
−
** [http://www.uniprot.org/uniprot/Q59618 Q59618]
 
−
** [http://www.uniprot.org/uniprot/Q59601 Q59601]
 
−
** [http://www.uniprot.org/uniprot/P75479 P75479]
 
−
** [http://www.uniprot.org/uniprot/P74498 P74498]
 
−
** [http://www.uniprot.org/uniprot/Q93841 Q93841]
 
−
** [http://www.uniprot.org/uniprot/Q22267 Q22267]
 
−
** [http://www.uniprot.org/uniprot/Q9S2M2 Q9S2M2]
 
−
** [http://www.uniprot.org/uniprot/Q9ZBS1 Q9ZBS1]
 
−
** [http://www.uniprot.org/uniprot/Q9US20 Q9US20]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=acyl-[acp]:1-acyl-sn-glycerol-3-phosphate 2-o-acyltransferase|1-acylglycerol-3-phosphate o-acyltransferase}}
 
−
{{#set: ec-number=ec-2.3.1.51}}
 
−
{{#set: nb gene associated=10}}
 
−
{{#set: nb pathway associated=2}}
 
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-7659

  • direction:
    • reversible
  • common-name:
    • dihydrogeranylgeranyl diphosphate reductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5063, phytyl diphosphate biosynthesis:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR112254
  • LIGAND-RXN:





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