Difference between revisions of "RXN-7674"

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(Created page with "Category:reaction == Reaction 2.1.1.72-RXN == * direction: ** left-to-right * common-name: ** site-specific dna-methyltransferase (adenine-specific) * ec-number: ** [http:...")
(Created page with "Category:reaction == Reaction RXN-14026 == * direction: ** left-to-right * common-name: ** cmp phosphatase ** 5'-nucleotidase * ec-number: ** [http://enzyme.expasy.org/EC/...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.1.1.72-RXN ==
+
== Reaction RXN-14026 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** site-specific dna-methyltransferase (adenine-specific)
+
** cmp phosphatase
 +
** 5'-nucleotidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.72 ec-2.1.1.72]
+
** [http://enzyme.expasy.org/EC/3.1.3.91 ec-3.1.3.91]
 +
** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DNA-Adenines]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DNA-Containing-N6-Methyladenine]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CYTIDINE]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09110]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ18895]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ15366]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18402]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16098]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ09030]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7185]], UTP and CTP dephosphorylation I:
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00511 R00511]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15198 15198]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29368 29368]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02961 R02961]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q7B7V5 Q7B7V5]
 
−
** [http://www.uniprot.org/uniprot/P44414 P44414]
 
−
** [http://www.uniprot.org/uniprot/Q57168 Q57168]
 
−
** [http://www.uniprot.org/uniprot/Q9PIS1 Q9PIS1]
 
−
** [http://www.uniprot.org/uniprot/P44431 P44431]
 
−
** [http://www.uniprot.org/uniprot/P95510 P95510]
 
−
** [http://www.uniprot.org/uniprot/P29749 P29749]
 
−
** [http://www.uniprot.org/uniprot/P14385 P14385]
 
−
** [http://www.uniprot.org/uniprot/P43422 P43422]
 
−
** [http://www.uniprot.org/uniprot/Q47911 Q47911]
 
−
** [http://www.uniprot.org/uniprot/P21311 P21311]
 
−
** [http://www.uniprot.org/uniprot/P14751 P14751]
 
−
** [http://www.uniprot.org/uniprot/P14827 P14827]
 
−
** [http://www.uniprot.org/uniprot/P25240 P25240]
 
−
** [http://www.uniprot.org/uniprot/P25239 P25239]
 
−
** [http://www.uniprot.org/uniprot/P29538 P29538]
 
−
** [http://www.uniprot.org/uniprot/Q03055 Q03055]
 
−
** [http://www.uniprot.org/uniprot/Q51829 Q51829]
 
−
** [http://www.uniprot.org/uniprot/P25238 P25238]
 
−
** [http://www.uniprot.org/uniprot/P35516 P35516]
 
−
** [http://www.uniprot.org/uniprot/P33563 P33563]
 
−
** [http://www.uniprot.org/uniprot/P43641 P43641]
 
−
** [http://www.uniprot.org/uniprot/P45454 P45454]
 
−
** [http://www.uniprot.org/uniprot/P50193 P50193]
 
−
** [http://www.uniprot.org/uniprot/Q56004 Q56004]
 
−
** [http://www.uniprot.org/uniprot/P73682 P73682]
 
−
** [http://www.uniprot.org/uniprot/P31118 P31118]
 
−
** [http://www.uniprot.org/uniprot/O41063 O41063]
 
−
** [http://www.uniprot.org/uniprot/P12427 P12427]
 
−
** [http://www.uniprot.org/uniprot/P04392 P04392]
 
−
** [http://www.uniprot.org/uniprot/P0AEE8 P0AEE8]
 
−
** [http://www.uniprot.org/uniprot/P08957 P08957]
 
−
** [http://www.uniprot.org/uniprot/P00472 P00472]
 
−
** [http://www.uniprot.org/uniprot/P04393 P04393]
 
−
** [http://www.uniprot.org/uniprot/P00473 P00473]
 
−
** [http://www.uniprot.org/uniprot/P24582 P24582]
 
−
** [http://www.uniprot.org/uniprot/P00474 P00474]
 
−
** [http://www.uniprot.org/uniprot/P04043 P04043]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=site-specific dna-methyltransferase (adenine-specific)}}
+
{{#set: common-name=5'-nucleotidase|cmp phosphatase}}
−
{{#set: ec-number=ec-2.1.1.72}}
+
{{#set: ec-number=ec-3.1.3.91|ec-3.1.3.5}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:25, 15 January 2021

Reaction RXN-14026

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7185, UTP and CTP dephosphorylation I:
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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