Difference between revisions of "RXN-7699"

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(Created page with "Category:reaction == Reaction 3.2.1.24-RXN == * direction: ** left-to-right * common-name: ** alpha-mannosidase ** alpha-mannosidase 2 * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction GDPPYPHOSKIN-RXN == * direction: ** left-to-right * common-name: ** gdp pyrophosphokinase ** gtp diphosphokinase * ec-number: ** [http://enzy...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.2.1.24-RXN ==
+
== Reaction GDPPYPHOSKIN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** alpha-mannosidase
+
** gdp pyrophosphokinase
−
** alpha-mannosidase 2
+
** gtp diphosphokinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.1.24 ec-3.2.1.24]
+
** [http://enzyme.expasy.org/EC/2.7.6.5 ec-2.7.6.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Alpha-D-Mannosides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13559]][c] '''+''' 1 [[Non-Glycosylated-sugar-Acceptors]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[GDP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GUANOSINE-5DP-3DP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ13961]]
−
* Gene: [[SJ11475]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ10100]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ11476]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ14176]]
+
* Gene: [[SJ07200]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ05107]]
+
* Gene: [[SJ14690]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ05034]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ08010]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PPGPPMET-PWY]], ppGpp metabolism:
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/P21139 P21139]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28099 28099]
−
** [http://www.uniprot.org/uniprot/P34098 P34098]
 
−
** [http://www.uniprot.org/uniprot/P39098 P39098]
 
−
** [http://www.uniprot.org/uniprot/P22855 P22855]
 
−
** [http://www.uniprot.org/uniprot/Q43249 Q43249]
 
−
** [http://www.uniprot.org/uniprot/O13344 O13344]
 
−
** [http://www.uniprot.org/uniprot/O46432 O46432]
 
−
** [http://www.uniprot.org/uniprot/O09159 O09159]
 
−
** [http://www.uniprot.org/uniprot/Q9NTJ4 Q9NTJ4]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=alpha-mannosidase|alpha-mannosidase 2}}
+
{{#set: common-name=gdp pyrophosphokinase|gtp diphosphokinase}}
−
{{#set: ec-number=ec-3.2.1.24}}
+
{{#set: ec-number=ec-2.7.6.5}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:02, 14 January 2021

Reaction GDPPYPHOSKIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • gdp pyrophosphokinase
    • gtp diphosphokinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PPGPPMET-PWY, ppGpp metabolism:
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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