Difference between revisions of "RXN-7706"

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(Created page with "Category:reaction == Reaction DHHB-METHYLTRANSFER-RXN == * direction: ** left-to-right * common-name: ** 3-demethylubiquinone-8 3-o-methyltransferase * ec-number: ** [http...")
(Created page with "Category:reaction == Reaction RXN-9235 == * direction: ** left-to-right * common-name: ** ubiquinone biosynthesis methyltransferase * ec-number: ** [http://enzyme.expasy.o...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DHHB-METHYLTRANSFER-RXN ==
+
== Reaction RXN-9235 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-demethylubiquinone-8 3-o-methyltransferase
+
** ubiquinone biosynthesis methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.64 ec-2.1.1.64]
+
** [http://enzyme.expasy.org/EC/2.1.1.201 ec-2.1.1.201]
−
* synonymous:
 
−
** 5-demethylubiquinone-8 methyltransferase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OCTAPRENYL-METHYL-OH-METHOXY-BENZQ]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9956]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-9869]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9871]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16864]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ02693]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ13007]]
+
* Gene: [[SJ07072]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ00609]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11757]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ20751]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11297]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02842]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic):
+
* [[PWY-5857]], ubiquinol-10 biosynthesis (prokaryotic):
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic):
+
* [[PWY-5872]], ubiquinol-10 biosynthesis (eukaryotic):
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28680 28680]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44765 44765]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P17993 P17993]
 
−
** [http://www.uniprot.org/uniprot/Q9JWE6 Q9JWE6]
 
−
** [http://www.uniprot.org/uniprot/Q9ZCT9 Q9ZCT9]
 
−
** [http://www.uniprot.org/uniprot/P37431 P37431]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-demethylubiquinone-8 3-o-methyltransferase}}
+
{{#set: common-name=ubiquinone biosynthesis methyltransferase}}
−
{{#set: ec-number=ec-2.1.1.64}}
+
{{#set: ec-number=ec-2.1.1.201}}
−
{{#set: synonymous=5-demethylubiquinone-8 methyltransferase}}
+
{{#set: nb gene associated=7}}
−
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:14, 14 January 2021

Reaction RXN-9235

  • direction:
    • left-to-right
  • common-name:
    • ubiquinone biosynthesis methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5857, ubiquinol-10 biosynthesis (prokaryotic):
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5872, ubiquinol-10 biosynthesis (eukaryotic):
    • 3 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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