Difference between revisions of "RXN-773"

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(Created page with "Category:reaction == Reaction TRANSALDOL-RXN == * direction: ** reversible * common-name: ** transaldolase * ec-number: ** [http://enzyme.expasy.org/EC/2.2.1.2 ec-2.2.1.2]...")
(Created page with "Category:reaction == Reaction RXN-773 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.13 ec-1.14.13] == Reaction formula == * 1 CPD-71...")
 
(5 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TRANSALDOL-RXN ==
+
== Reaction RXN-773 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** transaldolase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.2.1.2 ec-2.2.1.2]
+
** [http://enzyme.expasy.org/EC/1.14.13 ec-1.14.13]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-SEDOHEPTULOSE-7-P]][c] '''+''' 1 [[GAP]][c] '''<=>''' 1 [[ERYTHROSE-4P]][c] '''+''' 1 [[FRUCTOSE-6P]][c]
+
* 1 [[CPD-710]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-712]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12204]]
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* Gene: [[SJ05072]]
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18265]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-1861]], formaldehyde assimilation II (assimilatory RuMP Cycle):
+
* [[PWY-2582]], brassinosteroid biosynthesis II:
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''21''' reactions in the full pathway
−
* [[P124-PWY]], Bifidobacterium shunt:
+
* [[PWY-699]], brassinosteroid biosynthesis I:
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
** '''3''' reactions found over '''25''' reactions in the full pathway
−
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle):
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[NONOXIPENT-PWY]], pentose phosphate pathway (non-oxidative branch):
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5723]], Rubisco shunt:
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR111089
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17056 17056]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01827 R01827]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07454 R07454]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
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** [http://www.uniprot.org/uniprot/P17441 P17441]
+
{{#set: ec-number=ec-1.14.13}}
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** [http://www.uniprot.org/uniprot/P17440 P17440]
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{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P37837 P37837]
+
{{#set: nb pathway associated=2}}
−
** [http://www.uniprot.org/uniprot/P45055 P45055]
+
{{#set: reconstruction category=orthology}}
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** [http://www.uniprot.org/uniprot/Q9JSU1 Q9JSU1]
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{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/P0A867 P0A867]
 
−
** [http://www.uniprot.org/uniprot/Q9PIL5 Q9PIL5]
 
−
** [http://www.uniprot.org/uniprot/Q58370 Q58370]
 
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** [http://www.uniprot.org/uniprot/P34214 P34214]
 
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** [http://www.uniprot.org/uniprot/P0A870 P0A870]
 
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** [http://www.uniprot.org/uniprot/P15019 P15019]
 
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** [http://www.uniprot.org/uniprot/P53228 P53228]
 
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** [http://www.uniprot.org/uniprot/P51778 P51778]
 
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** [http://www.uniprot.org/uniprot/P72797 P72797]
 
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** [http://www.uniprot.org/uniprot/O04894 O04894]
 
−
** [http://www.uniprot.org/uniprot/P78865 P78865]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=transaldolase}}
 
−
{{#set: ec-number=ec-2.2.1.2}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=5}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-773

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2582, brassinosteroid biosynthesis II:
    • 4 reactions found over 21 reactions in the full pathway
  • PWY-699, brassinosteroid biosynthesis I:
    • 3 reactions found over 25 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR111089
  • LIGAND-RXN:





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