Difference between revisions of "RXN-7784"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9556 RXN-9556] == * direction: ** left-to-right * common-name: ** 3-oxo-cis-vaccenoyl-[acyl-car...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.20-RXN-5-METHYL-THF/NAD//METHYLENE-THF/NADH/PROTON.44. 1.5.1.20-RXN-5-METHYL-THF/NAD//METHYLE...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9556 RXN-9556] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.20-RXN-5-METHYL-THF/NAD//METHYLENE-THF/NADH/PROTON.44. 1.5.1.20-RXN-5-METHYL-THF/NAD//METHYLENE-THF/NADH/PROTON.44.] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** 3-oxo-cis-vaccenoyl-[acyl-carrier protein] reductase
 
** 3-oxo-cis-vaccenoyl-[acp] reductase
 
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[3-oxo-cis-vaccenoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxy-cis-vaccenoyl-ACPs]][c]
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* 1.0 [[METHYLENE-THF]][c] '''+''' 1.0 [[NADH]][c] '''+''' 1.0 [[PROTON]][c] '''=>''' 1.0 [[5-METHYL-THF]][c] '''+''' 1.0 [[NAD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ17743]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ04229]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ13014]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5973]], cis-vaccenate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5973 PWY-5973]
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=3-oxo-cis-vaccenoyl-[acyl-carrier protein] reductase|3-oxo-cis-vaccenoyl-[acp] reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}}
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{{#set: nb gene associated=0}}
{{#set: ec-number=ec-1.1.1.100}}
+
{{#set: nb pathway associated=0}}
{{#set: nb gene associated=3}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction tool=meneco}}
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 09:32, 27 August 2019

Reaction 1.5.1.20-RXN-5-METHYL-THF/NAD//METHYLENE-THF/NADH/PROTON.44.

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links