Difference between revisions of "RXN-7828"

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(Created page with "Category:reaction == Reaction RXN-15007 == * direction: ** reversible * common-name: ** [lysw]-l-glutamate 5-semialdehyde transaminase * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction RXN-7828 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1 ec-2.4.1] == Reaction formula == * 1 CPD-12575...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-15007 ==
+
== Reaction RXN-7828 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** [lysw]-l-glutamate 5-semialdehyde transaminase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.11 ec-2.6.1.11]
+
** [http://enzyme.expasy.org/EC/2.4.1 ec-2.4.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LysW-L-ornithine]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[LysW-L-glutamate-5-semialdehyde]][c]
+
* 1 [[CPD-12575]][c] '''+''' 1 [[PELARGONIDIN-3-GLUCOSIDE-CMPD]][c] '''=>''' 1 [[CPD-7137]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07216]]
+
* Gene: [[SJ06217]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10802]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria):
+
* [[PWY-5268]], salvianin biosynthesis:
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5139]], pelargonidin conjugates biosynthesis:
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R10932 R10932]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07874 R07874]
−
* RHEA:
+
* METANETX-RXN : MNXR143626
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=52675 52675]
+
{{#set: direction=left-to-right}}
−
{{#set: direction=reversible}}
+
{{#set: ec-number=ec-2.4.1}}
−
{{#set: common-name=[lysw]-l-glutamate 5-semialdehyde transaminase}}
+
{{#set: nb gene associated=2}}
−
{{#set: ec-number=ec-2.6.1.11}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb gene associated=1}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-7828

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5268, salvianin biosynthesis:
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5139, pelargonidin conjugates biosynthesis:
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR143626





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