Difference between revisions of "RXN-7836"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-15513 == * direction: ** reversible * common-name: ** phosphoglycerate mutase * ec-number: ** [http://enzyme.expasy.org/EC/5.4.2.11 ec-5....")
(Created page with "Category:reaction == Reaction GUANYL-KIN-RXN == * direction: ** left-to-right * common-name: ** guanylate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.4.8 ec-2....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-15513 ==
+
== Reaction GUANYL-KIN-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** phosphoglycerate mutase
+
** guanylate kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.4.2.11 ec-5.4.2.11]
+
** [http://enzyme.expasy.org/EC/2.7.4.8 ec-2.7.4.8]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-PG]][c] '''<=>''' 1 [[G3P]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[GMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13678]]
+
* Gene: [[SJ08624]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ14916]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ04335]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ21685]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ09590]]
+
* Gene: [[SJ12276]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ12497]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ15529]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate):
+
* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis:
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-1622]], formaldehyde assimilation I (serine pathway):
 
−
** '''6''' reactions found over '''13''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose):
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY66-399]], gluconeogenesis III:
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[P122-PWY]], heterolactic fermentation:
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate):
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* RHEA:
−
{{#set: common-name=phosphoglycerate mutase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20780 20780]
−
{{#set: ec-number=ec-5.4.2.11}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=6}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00332 R00332]
−
{{#set: nb pathway associated=6}}
+
* UNIPROT:
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/Q9PNB8 Q9PNB8]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/Q9CEE3 Q9CEE3]
 +
** [http://www.uniprot.org/uniprot/Q9JT96 Q9JT96]
 +
** [http://www.uniprot.org/uniprot/P44310 P44310]
 +
** [http://www.uniprot.org/uniprot/P15454 P15454]
 +
** [http://www.uniprot.org/uniprot/P60546 P60546]
 +
** [http://www.uniprot.org/uniprot/P31006 P31006]
 +
** [http://www.uniprot.org/uniprot/P46195 P46195]
 +
** [http://www.uniprot.org/uniprot/Q16774 Q16774]
 +
** [http://www.uniprot.org/uniprot/P72648 P72648]
 +
** [http://www.uniprot.org/uniprot/Q6RHR9 Q6RHR9]
 +
** [http://www.uniprot.org/uniprot/Q9M681 Q9M681]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=guanylate kinase}}
 +
{{#set: ec-number=ec-2.7.4.8}}
 +
{{#set: nb gene associated=3}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:36, 5 January 2021

Reaction GUANYL-KIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • guanylate kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7221, guanosine ribonucleotides de novo biosynthesis:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-7836&oldid=77154"