Difference between revisions of "RXN-7836"

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(Created page with "Category:reaction == Reaction GUANYL-KIN-RXN == * direction: ** left-to-right * common-name: ** guanylate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.4.8 ec-2....")
(Created page with "Category:reaction == Reaction RXN-7836 == * direction: ** reversible * common-name: ** peroxisomal 3,2-trans-enoyl-coa isomerase * ec-number: ** [http://enzyme.expasy.org/...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GUANYL-KIN-RXN ==
+
== Reaction RXN-7836 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** guanylate kinase
+
** peroxisomal 3,2-trans-enoyl-coa isomerase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.4.8 ec-2.7.4.8]
+
** [http://enzyme.expasy.org/EC/5.3.3.8 ec-5.3.3.8]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[GMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GDP]][c]
+
* 1 [[Trans-3-enoyl-CoAs]][c] '''<=>''' 1 [[TRANS-D2-ENOYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08624]]
+
* Gene: [[SJ07211]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ11169]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ04335]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ12276]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis:
+
* [[PWY-6837]], fatty acid &beta;-oxidation V (unsaturated, odd number, di-isomerase-dependent):
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5138]], fatty acid &beta;-oxidation IV (unsaturated, even number):
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20780 20780]
+
{{#set: common-name=peroxisomal 3,2-trans-enoyl-coa isomerase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-5.3.3.8}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00332 R00332]
+
{{#set: nb gene associated=2}}
−
* UNIPROT:
+
{{#set: nb pathway associated=2}}
−
** [http://www.uniprot.org/uniprot/Q9PNB8 Q9PNB8]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/Q9CEE3 Q9CEE3]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q9JT96 Q9JT96]
 
−
** [http://www.uniprot.org/uniprot/P44310 P44310]
 
−
** [http://www.uniprot.org/uniprot/P15454 P15454]
 
−
** [http://www.uniprot.org/uniprot/P60546 P60546]
 
−
** [http://www.uniprot.org/uniprot/P31006 P31006]
 
−
** [http://www.uniprot.org/uniprot/P46195 P46195]
 
−
** [http://www.uniprot.org/uniprot/Q16774 Q16774]
 
−
** [http://www.uniprot.org/uniprot/P72648 P72648]
 
−
** [http://www.uniprot.org/uniprot/Q6RHR9 Q6RHR9]
 
−
** [http://www.uniprot.org/uniprot/Q9M681 Q9M681]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=guanylate kinase}}
 
−
{{#set: ec-number=ec-2.7.4.8}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:18, 14 January 2021

Reaction RXN-7836

  • direction:
    • reversible
  • common-name:
    • peroxisomal 3,2-trans-enoyl-coa isomerase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6837, fatty acid β-oxidation V (unsaturated, odd number, di-isomerase-dependent):
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5138, fatty acid β-oxidation IV (unsaturated, even number):
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-7836&oldid=90183"