Difference between revisions of "RXN-7931"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.18-RXN 3.4.11.18-RXN] == * direction: ** left-to-right * common-name: ** methionine aminopep...")
 
(Created page with "Category:reaction == Reaction RXN-7931 == * direction: ** reversible * common-name: ** δ3,δ2-enoyl-coa isomerase * ec-number: ** [http://enzyme.expasy.org/EC/5...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.18-RXN 3.4.11.18-RXN] ==
+
== Reaction RXN-7931 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** methionine aminopeptidase
+
** δ3,δ2-enoyl-coa isomerase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.4.11.18 ec-3.4.11.18]
+
** [http://enzyme.expasy.org/EC/5.3.3.8 ec-5.3.3.8]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Protein-With-N-Terminal-Met]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Peptides-holder]][c]
+
* 1 [[CPD-7221]][c] '''<=>''' 1 [[CPD-7222]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ07211]]
−
* Gene: [[SJ01604]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ11169]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ16939]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ16932]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ16573]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ02903]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18138]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7291]], oleate &beta;-oxidation (isomerase-dependent, yeast):
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR108657
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/P38062 P38062]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23719 23719]
−
** [http://www.uniprot.org/uniprot/P47418 P47418]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/Q9PM25 Q9PM25]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04100 R04100]
−
** [http://www.uniprot.org/uniprot/P28617 P28617]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/P44421 P44421]
+
{{#set: common-name=&delta;3,&delta;2-enoyl-coa isomerase}}
−
** [http://www.uniprot.org/uniprot/Q9UYT4 Q9UYT4]
+
{{#set: ec-number=ec-5.3.3.8}}
−
** [http://www.uniprot.org/uniprot/P0AE18 P0AE18]
+
{{#set: nb gene associated=2}}
−
** [http://www.uniprot.org/uniprot/P50579 P50579]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/Q9JWK1 Q9JWK1]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/Q58725 Q58725]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P56218 P56218]
 
−
** [http://www.uniprot.org/uniprot/P19994 P19994]
 
−
** [http://www.uniprot.org/uniprot/P22624 P22624]
 
−
** [http://www.uniprot.org/uniprot/P0A1X6 P0A1X6]
 
−
** [http://www.uniprot.org/uniprot/P41392 P41392]
 
−
** [http://www.uniprot.org/uniprot/Q59509 Q59509]
 
−
** [http://www.uniprot.org/uniprot/Q01662 Q01662]
 
−
** [http://www.uniprot.org/uniprot/P95963 P95963]
 
−
** [http://www.uniprot.org/uniprot/P53579 P53579]
 
−
** [http://www.uniprot.org/uniprot/P53581 P53581]
 
−
** [http://www.uniprot.org/uniprot/P53580 P53580]
 
−
** [http://www.uniprot.org/uniprot/Q9FV49 Q9FV49]
 
−
** [http://www.uniprot.org/uniprot/Q9Z9J4 Q9Z9J4]
 
−
** [http://www.uniprot.org/uniprot/Q9RKR2 Q9RKR2]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=methionine aminopeptidase}}
 
−
{{#set: ec-number=ec-3.4.11.18}}
 
−
{{#set: nb gene associated=6}}
 
−
{{#set: nb pathway associated=0}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-7931

  • direction:
    • reversible
  • common-name:
    • δ3,δ2-enoyl-coa isomerase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7291, oleate β-oxidation (isomerase-dependent, yeast):
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR108657
  • RHEA:
  • LIGAND-RXN:





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