Difference between revisions of "RXN-7968"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.2.1.34-RXN 6.2.1.34-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.o...") |
(Created page with "Category:reaction == Reaction RXN-7968 == * direction: ** left-to-right * common-name: ** shikimate 3-dehydrogenase (nadp+) * ec-number: ** [http://enzyme.expasy.org/EC/1....") |
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN-7968 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| + | * common-name: | ||
| + | ** shikimate 3-dehydrogenase (nadp+) | ||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.1.1.282 ec-1.1.1.282] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[SHIKIMATE]][c] '''=>''' 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ10493]] |
| − | ** Category: [[ | + | ** Category: [[annotation]] |
| − | *** Source: [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: |
| − | + | ** '''6''' reactions found over '''5''' reactions in the full pathway | |
| − | |||
| − | ** ''' | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| − | |||
| − | |||
| − | |||
| − | |||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: ec-number=ec- | + | {{#set: common-name=shikimate 3-dehydrogenase (nadp+)}} |
| − | {{#set: nb gene associated= | + | {{#set: ec-number=ec-1.1.1.282}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb gene associated=1}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: nb pathway associated=1}} |
| − | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction category=orthology|annotation}} |
| + | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}} | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:18, 18 March 2021
Contents
Reaction RXN-7968
- direction:
- left-to-right
- common-name:
- shikimate 3-dehydrogenase (nadp+)
- ec-number:
Reaction formula
- 1 NAD-P-OR-NOP[c] + 1 SHIKIMATE[c] => 1 3-DEHYDRO-SHIKIMATE[c] + 1 NADH-P-OR-NOP[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ10493
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6163, chorismate biosynthesis from 3-dehydroquinate:
- 6 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
