Difference between revisions of "RXN-7978"

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(Created page with "Category:reaction == Reaction PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.16 ec-1.14.11.16...")
(Created page with "Category:reaction == Reaction RXN-7978 == * direction: ** left-to-right * synonymous: ** zea-epoxidase == Reaction formula == * 1 CPD1F-130[c] '''+''' 1 OXYGEN-MOLEC...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN ==
+
== Reaction RXN-7978 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* ec-number:
+
* synonymous:
−
** [http://enzyme.expasy.org/EC/1.14.11.16 ec-1.14.11.16]
+
** zea-epoxidase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Protein-L-Aspartates]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Peptide-3-hydroxy-L-Aspartates]][c] '''+''' 1 [[SUC]][c]
+
* 1 [[CPD1F-130]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD1F-131]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07629]]
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* Gene: [[SJ1973]]
−
** Category: [[orthology]]
+
** Category: [[manual]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
−
* Gene: [[SJ12047]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ09376]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19825]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ10867]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5945]], violaxanthin, antheraxanthin and zeaxanthin interconversion:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[sjap]]; tool: [[curation]]; comment: transformation of zeaxanthin into antheraxanthin (first cycle of xanthophylls)
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR110670
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11508 11508]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04073 R04073]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07199 R07199]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q28056 Q28056]
 
−
** [http://www.uniprot.org/uniprot/Q93178 Q93178]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.14.11.16}}
+
{{#set: synonymous=zea-epoxidase}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=transformation of zeaxanthin into antheraxanthin (first cycle of xanthophylls)}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=sjap}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-7978

  • direction:
    • left-to-right
  • synonymous:
    • zea-epoxidase

Reaction formula

Gene(s) associated with this reaction

  • Gene: SJ1973
    • Category: manual
      • Source: sjap, Tool: unknown-tool, Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)

Pathway(s)

  • PWY-5945, violaxanthin, antheraxanthin and zeaxanthin interconversion:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

  • category: manual; source: sjap; tool: curation; comment: transformation of zeaxanthin into antheraxanthin (first cycle of xanthophylls)

External links

  • METANETX-RXN : MNXR110670
  • LIGAND-RXN:





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