Difference between revisions of "RXN-7978"
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(Created page with "Category:reaction == Reaction RXN-22198 == * direction: ** left-to-right == Reaction formula == * 1.0 CPD-24185[c] '''=>''' 1.0 CPD-22095[c] == Gene(s) associated...") |
(Created page with "Category:reaction == Reaction PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.16 ec-1.14.11.16...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| + | * ec-number: | ||
| + | ** [http://enzyme.expasy.org/EC/1.14.11.16 ec-1.14.11.16] | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Protein-L-Aspartates]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Peptide-3-hydroxy-L-Aspartates]][c] '''+''' 1 [[SUC]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ07629]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** Source: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| + | * Gene: [[SJ12047]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[SJ09376]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ19825]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[SJ10867]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11508 11508] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R04073 R04073] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/Q28056 Q28056] | ||
| + | ** [http://www.uniprot.org/uniprot/Q93178 Q93178] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: nb gene associated= | + | {{#set: ec-number=ec-1.14.11.16}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb gene associated=5}} |
| − | {{#set: reconstruction category= | + | {{#set: nb pathway associated=0}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction comment= | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction comment=n.a}} |
| + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | ||
Revision as of 13:14, 14 January 2021
Contents
Reaction PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN
- direction:
- left-to-right
- ec-number:
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 OXYGEN-MOLECULE[c] + 1 Protein-L-Aspartates[c] => 1 CARBON-DIOXIDE[c] + 1 Peptide-3-hydroxy-L-Aspartates[c] + 1 SUC[c]
Gene(s) associated with this reaction
- Gene: SJ07629
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ12047
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ09376
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ19825
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ10867
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
