Difference between revisions of "RXN-7984"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-13 RXN66-13] == * direction: ** left-to-right * common-name: ** 4,4-dimethyl-14α-formyl...")
(Created page with "Category:reaction == Reaction RXN-7984 == * direction: ** left-to-right * common-name: ** violaxanthin de-epoxidase * synonymous: ** vde == Reaction formula == * 1 ASCOR...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-13 RXN66-13] ==
+
== Reaction RXN-7984 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 4,4-dimethyl-14α-formyl-5α-cholesta-8-en-3β-ol deformylase
+
** violaxanthin de-epoxidase
−
** 4,4-dimethyl-14α-formyl-5α-cholesta-8-en-3β-ol,nadph:oxygen oxidoreductase
+
* synonymous:
 +
** vde
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-8608]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-8609]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[ASCORBATE]][c] '''+''' 1 [[CPD1F-133]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD1F-131]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05072]]
+
* Gene: [[SJ19927]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03764]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ20456]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-3]], cholesterol biosynthesis II (via 24,25-dihydrolanosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-3 PWY66-3]
+
* [[PWY-5945]], violaxanthin, antheraxanthin and zeaxanthin interconversion:
−
** '''12''' reactions found over '''18''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR138919
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15354 15354]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07178 R07178]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=4,4-dimethyl-14α-formyl-5α-cholesta-8-en-3β-ol deformylase|4,4-dimethyl-14α-formyl-5α-cholesta-8-en-3β-ol,nadph:oxygen oxidoreductase}}
+
{{#set: common-name=violaxanthin de-epoxidase}}
−
{{#set: nb gene associated=1}}
+
{{#set: synonymous=vde}}
 +
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-7984

  • direction:
    • left-to-right
  • common-name:
    • violaxanthin de-epoxidase
  • synonymous:
    • vde

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5945, violaxanthin, antheraxanthin and zeaxanthin interconversion:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR138919
  • RHEA:
  • LIGAND-RXN:





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