Difference between revisions of "RXN-8026"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7586 PWY-7586] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-68336 tax-6...")
(Created page with "Category:reaction == Reaction RXN-8026 == * direction: ** left-to-right * synonymous: ** crtz == Reaction formula == * 1 CPD-7409[c] '''+''' 1 OXYGEN-MOLECULE[c] '...")
 
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[[Category:pathway]]
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[[Category:reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7586 PWY-7586] ==
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== Reaction RXN-8026 ==
* taxonomic-range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=tax-68336 tax-68336]
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** left-to-right
* common-name:
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* synonymous:
** β-1,4-d-mannosyl-n-acetyl-d-glucosamine degradation
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** crtz
== Reaction(s) found ==
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== Reaction formula ==
* [[MANNPISOM-RXN]]
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* 1 [[CPD-7409]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD1F-130]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
* [[PHOSMANMUT-RXN]]
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== Gene(s) associated with this reaction  ==
== Reaction(s) not found ==
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* Gene: [[SJ07227]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15203 RXN-15203]
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** Category: [[manual]]
{{#set: taxonomic-range=tax-68336}}
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*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
{{#set: common-name=β-1,4-d-mannosyl-n-acetyl-d-glucosamine degradation}}
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* Gene: [[SJ07228]]
{{#set: nb reaction found=2}}
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** Category: [[manual]]
{{#set: completion rate=0.67}}
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*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
{{#set: nb total reaction=3}}
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== Pathway(s) ==
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* [[PWY-7638]], echinenone and zeaxanthin biosynthesis (Synechocystis):
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5944]], zeaxanthin biosynthesis:
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5288]], astaxanthin biosynthesis (bacteria, fungi, algae):
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** '''2''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[manual]]; source: [[sjap]]; tool: [[curation]]; comment: transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)
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== External links  ==
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* METANETX-RXN : MNXR111180
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R07559 R07559]
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30330 30330]
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{{#set: direction=left-to-right}}
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{{#set: synonymous=crtz}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=3}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction tool=curation}}
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{{#set: reconstruction comment=transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)}}
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{{#set: reconstruction source=sjap}}

Latest revision as of 11:22, 18 March 2021

Reaction RXN-8026

  • direction:
    • left-to-right
  • synonymous:
    • crtz

Reaction formula

Gene(s) associated with this reaction

  • Gene: SJ07227
    • Category: manual
      • Source: sjap, Tool: unknown-tool, Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
  • Gene: SJ07228
    • Category: manual
      • Source: sjap, Tool: unknown-tool, Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)

Pathway(s)

  • PWY-7638, echinenone and zeaxanthin biosynthesis (Synechocystis):
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5944, zeaxanthin biosynthesis:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5288, astaxanthin biosynthesis (bacteria, fungi, algae):
    • 2 reactions found over 10 reactions in the full pathway

Reconstruction information

  • category: manual; source: sjap; tool: curation; comment: transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)

External links

  • METANETX-RXN : MNXR111180
  • LIGAND-RXN:
  • RHEA: