Difference between revisions of "RXN-8026"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-17884 == * direction: ** left-to-right * common-name: ** s-nitrosoglutathione reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.1....")
(Created page with "Category:reaction == Reaction RXN-8026 == * direction: ** left-to-right * synonymous: ** crtz == Reaction formula == * 1 CPD-7409[c] '''+''' 1 OXYGEN-MOLECULE[c] '...")
 
(3 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-17884 ==
+
== Reaction RXN-8026 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
+
* synonymous:
** s-nitrosoglutathione reductase
+
** crtz
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.1.1.284 ec-1.1.1.284]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[S-NITROSOGLUTATHIONE]][c] '''=>''' 1 [[CPD-19217]][c] '''+''' 1 [[NAD]][c]
+
* 1 [[CPD-7409]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD1F-130]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ21601]]
+
* Gene: [[SJ07227]]
** Category: [[annotation]]
+
** Category: [[manual]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 +
* Gene: [[SJ07228]]
 +
** Category: [[manual]]
 +
*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7798]], protein S-nitrosylation and denitrosylation:
+
* [[PWY-7638]], echinenone and zeaxanthin biosynthesis (Synechocystis):
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5944]], zeaxanthin biosynthesis:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5288]], astaxanthin biosynthesis (bacteria, fungi, algae):
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[sjap]]; tool: [[curation]]; comment: transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR111180
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07559 R07559]
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30330 30330]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=s-nitrosoglutathione reductase}}
+
{{#set: synonymous=crtz}}
{{#set: ec-number=ec-1.1.1.284}}
+
{{#set: nb gene associated=2}}
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=3}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction comment=transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=sjap}}
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Latest revision as of 11:22, 18 March 2021

Reaction RXN-8026

  • direction:
    • left-to-right
  • synonymous:
    • crtz

Reaction formula

Gene(s) associated with this reaction

  • Gene: SJ07227
    • Category: manual
      • Source: sjap, Tool: unknown-tool, Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
  • Gene: SJ07228
    • Category: manual
      • Source: sjap, Tool: unknown-tool, Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)

Pathway(s)

  • PWY-7638, echinenone and zeaxanthin biosynthesis (Synechocystis):
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5944, zeaxanthin biosynthesis:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5288, astaxanthin biosynthesis (bacteria, fungi, algae):
    • 2 reactions found over 10 reactions in the full pathway

Reconstruction information

  • category: manual; source: sjap; tool: curation; comment: transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)

External links

  • METANETX-RXN : MNXR111180
  • LIGAND-RXN:
  • RHEA: